If you find this webserver useful, please cite us!

• Zea, D. J., Richard, H., & Laine, E. (2022). ASES: visualizing evolutionary conservation of alternative splicing in proteins. Bioinformatics. doi:10.1093/bioinformatics/btac105

Primary citation for ThorAxe:

• Zea DJ, Laskina S, Baudin A, Richard H, Laine E. Assessing conservation of alternative splicing with evolutionary splicing graphs. Genome Research. 2021 Jun 15:gr-274696. doi: 10.1101/gr.274696.120.

Primary citation for PhyloSofS:

• Ait-hamlat A, Zea DJ, Labeeuw A, Polit L, Richard H and Laine E (2020) Transcripts’ evolutionary history and structural dynamics give mechanistic insights into the functional diversity of the JNK family. J Mol Biol. 432:2121-2140 ( PDF).

Seminal work from which PhyloSofS is inspired:

• Christinat Y, Moret BM (2012) Inferring transcript phylogenies. BMC Bioinformatics. 13 Suppl 9:S1.