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Publications

Evdokimov AA, Sclavi B, Zinoviev VV, Malygin EG, Hattman S, Buckle M.
Study of bacteriophage T4-encoded Dam DNA (adenine-N6)-methyltransferase binding with substrates by rapid laser UV cross-linking.
J Biol Chem. 282(36), pp.26067-76 (2007).
Gheorghiu-Svirschevski S, IM Rouzine, Coffin JM.
Increasing sequence correlation limits the efficiency of recombination in a multisite evolution model.
Mol Biol Evol. 24(2), pp.574-86 (2007).
IM Rouzine, Coffin JM.
Highly fit ancestors of a partly sexual haploid population.
Theor Popul Biol. 71(2), pp.239-50 (2007).
Baussand J, Carbone A.
Metagénomique bactérienne et virale - nouvelles définitions d'espace microbien et nouveaux défis algorithmiques.
Technique et Sciences Informatiques, special issue on "Modeling, simulations in postgenomics", Hérmes. (2007).
Breton J, Bart-Delabesse E, Biligui S, Carbone A, Seiller X, Okome-Nkoumou M, Nzamba C, Kombila M, Accoceberry I, Thellier M.
New Highly Divergent rRNA Sequence among Biodiverse Genotypes of Enterocytozoon bieneusi Strains Isolated from Humans in Gabon and Cameroon.
Journal of Clinical Microbiology. 45, pp.2580-2589 (2007).
Cosentino Lagomarsino M, Sellerio A, Isambert H, Bassetti B
A large-scale evolutionary approach to the analysis of transcription networks.
in SYSBIOHEALTH Symposium. Milano. Locomia Innovazione Publ. . (2007)
Montsant A, Allen AE, Coesel S, De Martino A, Falciatore A, Mangogna M, Siaut M, Heijde M, Jabbari K, Maheswari U, Rayko E, Vardi A, Apt KE, Berges JA, Chiovitti A, Davis AK, Thamatrakoln K, Hadi MZ, Lane TW, J. Lippmeier C, Martinez D, Parker MS, Pazour GJ, Saito MA, Rokhsar DS, E. Armbrust V, Bowler C.
Identification and comparative genomic analysis of signaling and regulatory components in the diatom Thalassiosira pseudonana.
Journal of Phycology. 43, pp.585–604 (2007).
Lacoste D, Cosentino Lagomarsino M, Joanny JF.
Fluctuations of a driven membrane in an electrolyte.
EPL (Europhysics Letters). 77, pp.18006 (2007).
Baussand J, Deremble C, Carbone A.
Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins.
Proteins. 67(3), pp.695-708 (2007).
Carbone A
Adaptation studied with the self-consistent codon index: genomic spaces, metabolic network comparison, minimal gene sets and viral classification.
in Proceedings of the Evry Spring School on Modelling Complex Biological Systems in the Context of Genomics. Genopole, Evry. EDP Sciences. (2007)
Bassetti F, Cosentino Lagomarsino M, Mandrà S.
Exchangeable random networks.
Internet Mathematics. 4, pp.357–400 (2007).
Llopis I, Pagonabarraga I, Cosentino Lagomarsino M, Lowe CP.
Sedimentation of pairs of hydrodynamically interacting semiflexible filaments.
Phys Rev E Stat Nonlin Soft Matter Phys. 76(6 Pt 1), pp.061901 (2007).
Bassetti F, Cosentino Lagomarsino M, Bassetti B, Jona P.
Random networks tossing biased coins.
Phys Rev E Stat Nonlin Soft Matter Phys. 75(5 Pt 2), pp.056109 (2007).
Siaut M, Heijde M, Mangogna M, Montsant A, Coesel S, Allen A, Manfredonia A, Falciatore A, Bowler C.
Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum.
Gene. 406(1-2), pp.23-35 (2007).
Fusco D, Bassetti B, Jona P, Cosentino Lagomarsino M.
DIA-MCIS: an importance sampling network randomizer for network motif discovery and other topological observables in transcription networks.
Bioinformatics. 23(24), pp.3388-90 (2007).

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