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Publications

Le Crom S, Devaux F, Marc P, Zhang X, W Moye-Rowley S, Jacq C. New insights into the pleiotropic drug resistance network from genome-wide characterization of the YRR1 transcription factor regulation system. Mol Cell Biol. 22(8), pp.2642-9 (2002).
Marc P, Devaux F, Jacq C. yMGV: a database for visualization and data mining of published genome-wide yeast expression data. Nucleic Acids Res. 29(13), pp.E63-3 (2001).
IM Rouzine, Rodrigo A, Coffin JM. Transition between stochastic evolution and deterministic evolution in the presence of selection: general theory and application to virology. Microbiol Mol Biol Rev. 65(1), pp.151-85 (2001).
Gromov M, Carbone A. Mathematical slices of molecular biology. La Gazette des Mathématiciens, Société Mathématique de France, special edition. pp.11-80 (2001).
Devaux F, Marc P, Jacq C. Transcriptomes, transcription activators and microarrays. FEBS Lett. 498(2-3), pp.140-4 (2001).
Fischer G, Neuveglise C, Durrens P, Gaillardin C, Dujon B. Evolution of gene order in the genomes of two related yeast species. Genome Res. 11(12), pp.2009-19 (2001).
Devaux F, Marc P, Bouchoux C, Delaveau T, Hikkel I, Potier MC, Jacq C. An artificial transcription activator mimics the genome-wide properties of the yeast Pdr1 transcription factor. EMBO Rep. 2(6), pp.493-8 (2001).
Ralston CY, Sclavi B, Brenowitz M, Sullivan M, Chance MR. The Early Folding Intermediates of the Tetrahymena Ribozyme are Kinetically Trapped. J Biomol Struct Dyn. 17 Suppl 1, pp.195-200 (2000).
Sclavi B, Roux P Kinetic analysis of enzyme-template interactions. Nucleotide incorporation by DNA-dependent RNA and DNA polymerases. in DNA-protein Interactions: A Practical Approach. Edited by: Buckle, M and Travers, A. eds. Oxford, UK. Oxford University Press. pp. 239-256 (2000)
Ralston CY, Sclavi B, Sullivan M, Deras ML, Woodson SA, Chance MR, Brenowitz M. Time-resolved synchrotron X-ray footprinting and its application to RNA folding. Methods Enzymol. 317, pp.353-68 (2000).
Carbone A, Gromov M, Prusinkiewicz P. Pattern formation in biology, vision and dynamics. World Scientific Publishing Company. , (2000).
Bassetti B, Cosentino Lagomarsino M, Jona P. A model for the self-organization of microtubules driven by molecular motors. The European Physical Journal B-Condensed Matter and Complex Systems. 15, pp.483–492 (2000).
Fischer G, James SA, Roberts IN, Oliver SG, Louis EJ. Chromosomal evolution in Saccharomyces. Nature. 405(6785), pp.451-4 (2000).
Falciatore A, Riberà d'Alcalà M, Croot P, Bowler C. Perception of environmental signals by a marine diatom. Science. 288(5475), pp.2363-6 (2000).
IM Rouzine, Coffin JM Interplay Between Experiment and Theory in Development of a Working Model for {HIV}-1 Population Dynamics. in Origin and Evolution of Viruses. Elsevier. pp. 225–262 (1999)

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