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Publications

Fischer G, Thompson D, Wortman JRusso, Fairhead C.
Unraveling the genomic diversity of small eukaryotes.
Genome Biol. 10(12), pp.318 (2009).
Bassetti B, Zarei M, Cosentino Lagomarsino M, Bianconi G.
Statistical mechanics of the "Chinese restaurant process": lack of self-averaging, anomalous finite-size effects, and condensation.
Phys Rev E Stat Nonlin Soft Matter Phys. 80(6 Pt 2), pp.066118 (2009).
Coesel S, Mangogna M, Ishikawa T, Heijde M, Rogato A, Finazzi G, Todo T, Bowler C, Falciatore A.
Diatom PtCPF1 is a new cryptochrome/photolyase family member with DNA repair and transcription regulation activity.
EMBO Rep. 10(6), pp.655-61 (2009).
Koszul R, Fischer G.
A prominent role for segmental duplications in modeling eukaryotic genomes.
C R Biol. 332(2-3), pp.254-66 (2009).
Ciandrini L, Maffi C, Motta A, Bassetti B, Cosentino Lagomarsino M.
Feedback topology and XOR-dynamics in Boolean networks with varying input structure.
Phys Rev E Stat Nonlin Soft Matter Phys. 80(2 Pt 2), pp.026122 (2009).
Hu H, Wrogemann K, Kalscheuer V, Tzschach A, Richard H, Haas SA, Menzel C, Bienek M, Froyen G, Raynaud M, Van Bokhoven H, Chelly J, Ropers H, Chen W.
Erratum to: Mutation screening in 86 known X-linked mental retardation genes by droplet-based multiplex PCR and massive parallel sequencing.
Hugo J. 3(1-4), pp.83 (2009).
De Riso V, Raniello R, Maumus F, Rogato A, Bowler C, Falciatore A.
Gene silencing in the marine diatom Phaeodactylum tricornutum.
Nucleic Acids Res. 37(14), pp.e96 (2009).
Payen C, Fischer G, Marck C, Proux C, Sherman DJames, Coppée J-Y, Johnston M, Dujon B, Neuvéglise C.
Unusual composition of a yeast chromosome arm is associated with its delayed replication.
Genome Res. 19(10), pp.1710-21 (2009).
Cosentino Lagomarsino M, Bassetti B, Castellani G, Remondini D.
Functional models for large-scale gene regulation networks: realism and fiction.
Mol Biosyst. 5(4), pp.335-44 (2009).
Baussand J, Carbone A.
A combinatorial approach to detect coevolved amino acid networks in protein families of variable divergence.
PLoS Comput Biol. 5(9), pp.e1000488 (2009).
Schug A, Weigt M, Onuchic JN, Hwa T, Szurmant H.
High-resolution protein complexes from integrating genomic information with molecular simulation.
Proc Natl Acad Sci U S A. 106(52), pp.22124-9 (2009).
Souciet J-L, Dujon B, Gaillardin C, Johnston M, Baret PV, Cliften P, Sherman DJ, Weissenbach J, Westhof E, Wincker P, Jubin C, Poulain J, Barbe V, Ségurens B, Artiguenave F, Anthouard V, Vacherie B, Val M-E, Fulton RS, Minx P, Wilson R, Durrens P, Jean G, Marck C, Martin T, Nikolski M, Rolland T, Seret M-L, Casaregola S, Despons L, Fairhead C, Fischer G, Lafontaine I, Leh V, Lemaire M, De Montigny J, Neuvéglise C, Thierry A, Blanc-Lenfle I, Bleykasten C, Diffels J, Fritsch E, Frangeul L, Goëffon A, Jauniaux N, Kachouri-Lafond R, Payen C, Potier S, Pribylova L, Ozanne C, Richard G-F, Sacerdot C, Straub M-L, Talla E.
Comparative genomics of protoploid Saccharomycetaceae.
Genome Res. 19(10), pp.1696-709 (2009).
Cosentino Lagomarsino M, Sellerio AL, Heijning PD, Bassetti B.
Universal features in the genome-level evolution of protein domains.
Genome Biol. 10(1), pp.R12 (2009).
Váchová L, Kučerová H, Devaux F, lehlová MÚ, Palková Z.
Metabolic diversification of cells during the development of yeast colonies.
Environ Microbiol. 11(2), pp.494-504 (2009).
Weigt M, White RA, Szurmant H, Hoch JA, Hwa T.
Identification of direct residue contacts in protein-protein interaction by message passing.
Proc Natl Acad Sci U S A. 106(1), pp.67-72 (2009).

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