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Battisti A, Zamuner S, Sarti E, Laio A. Toward a unified scoring function for native state discrimination and drug-binding pocket recognition. Physical Chemistry Chemical Physics. 20(25), pp.17148 - 17155 (2018).
Aleksandrova AA, Sarti E, Forrest LR. EncoMPASS: an Encyclopedia of Membrane Proteins Analyzed by Structure and Symmetry. bioRxiv. pp.391961 (2018).
Campos DA, Pereira EC, Jardim R, Cuadrat RRC, Bernardes JS, Dávila AMR. Homology Inference Based on a Reconciliation Approach for the Comparative Genomics of Protozoa. Evolutionary Bioinformatics. 14, pp.1176934318785138 (2018).
Lemaire SD, Tedesco D, Crozet P, Michelet L, Fermani S, Zaffagnini M, Henri J. Crystal Structure of Chloroplastic Thioredoxin f2 from Chlamydomonas reinhardtii Reveals Distinct Surface Properties. Antioxidants (Basel). 7, (2018).
Zhan Y, Marchand CH, Maes A, Mauries A, Sun Y, Dhaliwal JS, Uniacke J, Arragain S, Jiang H, Gold ND, Martin VJJ, Lemaire SD, Zerges W. Pyrenoid functions revealed by proteomics in Chlamydomonas reinhardtii. PLoS One. 13, pp.e0185039 (2018).
Maes A, Martinez X, Druart K, Laurent B, Guegan S, Marchand CH, Lemaire SD, Baaden M. MinOmics, an Integrative and Immersive Tool for Multi-Omics Analysis. J Integr Bioinform. 15, (2018).
Crozet P, Navarro FJ, Willmund F, Mehrshahi P, Bakowski K, Lauersen KJ, Perez-Perez ME, Auroy P, A. Rovira G, Sauret-Gueto S, Niemeyer J, Spaniol B, Theis J, Trosch R, Westrich LD, Vavitsas K, Baier T, Hubner W, de Carpentier F, Cassarini M, Danon A, Henri J, Marchand CH, De Mia M, Sarkissian K, Baulcombe DC, Peltier G, Crespo JL, Kruse O, Jensen PE, Schroda M, Smith AG, Lemaire SD. Birth of a Photosynthetic Chassis: A MoClo Toolkit Enabling Synthetic Biology in the Microalga Chlamydomonas reinhardtii. ACS Synth Biol. 7, pp.2074-2086 (2018).
Saad C, Noé L, Richard H, Leclerc J, Buisine M-P, Touzet H, Figeac M. DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data. 19(1), pp.223 (2018).
Shrestha AMS, Frith MC, Asai K, Richard H. Jointly aligning a group of DNA reads improves accuracy of identifying large deletions. Nucleic acids research. 46(3), pp.e18 - e18 (2018).
Zhang W, Hamouri F, Feng Z, Aujard I, Ducos B, Ye S, Weiss S, Volovitch M, Vriz S, Jullien L, Bensimon D. Control of Protein Activity and Gene Expression by Cyclofen-OH Uncaging. Chembiochem. 19(12), pp.1232-1238 (2018).
Coutelier H, Xu Z, Morisse MChenda, Lhuillier-Akakpo M, Pelet S, Charvin G, Dubrana K, Teixeira MTeresa. Adaptation to DNA damage checkpoint in senescent telomerase-negative cells promotes genome instability. Genes Dev. 32(23-24), pp.1499-1513 (2018).
Benchouaia M, Ripoche H, Sissoko M, Thiebaut A, Merhej J, Delaveau T, Fasseu L, Benaissa S, Lorieux G, Jourdren L, Le Crom S, Lelandais G, Corel E, Devaux F. Comparative Transcriptomics Highlights New Features of the Iron Starvation Response in the Human Pathogen . Front Microbiol. 9, pp.2689 (2018).
Negri M, Gherardi M, Tiana G, Cosentino Lagomarsino M. Spontaneous domain formation in disordered copolymers as a mechanism for chromosome structuring. Soft Matter. 14(29), pp.6128 - 6136 (2018).
Micali G, Grilli J, Marchi J, Osella M, Cosentino Lagomarsino M. Dissecting the Control Mechanisms for DNA Replication and Cell Division in E. coli. Cell Rep. 25(3), pp.761-771.e4 (2018).
Yu S, Sheats J, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD. Subdiffusion of loci and cytoplasmic particles are different in compressed Escherichia coli cells. 1(1), pp.176 (2018).