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Publications

Olliver A, Saggioro C, Herrick J, Sclavi B.
DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli.
Mol Microbiol. 76(6), pp.1555-71 (2010).
Adrover M, Pauwels K, Prigent S, de Chiara C, Xu Z, Chapuis C, Pastore A, Rezaei H.
Prion fibrillization is mediated by a native structural element that comprises helices H2 and H3.
J Biol Chem. 285(27), pp.21004-12 (2010).
Ye S, Berger AAnn, Petzold D, Reimann O, Matt B, Koksch B.
Chemical aminoacylation of tRNAs with fluorinated amino acids for in vitro protein mutagenesis.
O’Hagan D (Eds.). Beilstein Journal of Organic Chemistry. 6, pp.40 (2010).
IM Rouzine, Coffin JM.
Multi-site adaptation in the presence of infrequent recombination.
Theoretical population biology. 77, pp.189–204 (2010).
Sergeev RA, Batorsky RE, IM Rouzine.
Model with two types of CTL regulation and experiments on CTL dynamics.
J Theor Biol. 263(3), pp.369-84 (2010).
Ye S, Zaitseva E, Caltabiano G, Schertler GFX, Sakmar TP, Deupi X, Vogel R.
Tracking G-protein-coupled receptor activation using genetically encoded infrared probes.
Nature. 464(7293), pp.1386-9 (2010).
Di Marino D, Oteri F, Rocca BMorozzo De, Chillemi G, Falconi M.
ADP/ATP mitochondrial carrier MD simulations to shed light on the structural-dynamical events that, after an additional mutation, restore the function in a pathological single mutant.
J Struct Biol. 172(3), pp.225-32 (2010).
Oliveira CLuis Pinto, Juul S, Jørgensen HLaerke, Knudsen B, Tordrup D, Oteri F, Falconi M, Koch J, Desideri A, Pedersen JSkov, Andersen FFaucon, Knudsen BRuth.
Structure of nanoscale truncated octahedral DNA cages: variation of single-stranded linker regions and influence on assembly yields.
ACS Nano. 4(3), pp.1367-76 (2010).
Bernicot F, Maury B, Salort D.
A 2-adic approach of the human respiratory tree.
ArXiv e-prints. (2010).
Pakdaman K, Perthame B, Salort D.
Dynamics of a structured neuron population.
Nonlinearity. 23, pp.55 (2010).
Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LDW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TAF, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Lin Y-C, George J, Sweedler J, Southey B, Gunaratne P, Watson M, Nam K, Backstrom N, Smeds L, Nabholz B, Itoh Y, Whitney O, Pfenning AR, Howard J, Volker M, Skinner BM, Griffin DK, Ye L, McLaren WM, Flicek P, Quesada V, Velasco G, Lopez-Otin C, Puente XS, Olender T, Lancet D, Smit AFA, Hubley R, Konkel MK, Walker JA, Batzer MA, Gu W, Pollock DD, Chen L, Cheng Z, Eichler EE, Stapley J, Slate J, Ekblom R, Birkhead T, Burke T, Burt D, Scharff C, Adam I, Richard H, Sultan M, Soldatov A, Lehrach H, Edwards SV, Yang S-P, Li XC, Graves T, Fulton L, Nelson J, Chinwalla A, Hou S, et al..
The genome of a songbird.
Nature. 464(7289), pp.757 - 762 (2010).
Bradde S, Weigt M, Braunstein A, Zecchina R, Tria F, Mahmoudi H.
Aligning graphs and finding substructures by message passing.
Europhys. Lett. . 89(37009), (2010).
Jourdren L, Delaveau T, Marquenet E, Jacq C, Garcia M.
CORSEN, a new software dedicated to microscope-based 3D distance measurements: mRNA-mitochondria distance, from single-cell to population analyses.
RNA. 16(7), pp.1301-7 (2010).
Heijde M, Zabulon G, Corellou F, Ishikawa T, Brazard J, Usman A, Sanchez F, Plaza P, Martin M, Falciatore A, Todo T, Bouget F-Y, Bowler C.
Characterization of two members of the cryptochrome/photolyase family from Ostreococcus tauri provides insights into the origin and evolution of cryptochromes.
Plant Cell Environ. 33(10), pp.1614-26 (2010).
Mathelier A, Carbone A.
MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data.
Bioinformatics. 26(18), pp.2226-34 (2010).

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