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Publications

Fusco D, Grassi L, Bassetti B, Caselle M, Cosentino Lagomarsino M.
Ordered structure of the transcription network inherited from the yeast whole-genome duplication.
BMC Syst Biol. 4, pp.77 (2010).
Bailleul B, Rogato A, De Martino A, Coesel S, Cardol P, Bowler C, Falciatore A, Finazzi G.
An atypical member of the light-harvesting complex stress-related protein family modulates diatom responses to light.
Proc Natl Acad Sci U S A. 107(42), pp.18214-9 (2010).
Richard H, Schulz MH, Sultan M, Nürnberger A, Schrinner S, Balzereit D, Dagand E, Rasche A, Lehrach H, Vingron M, Haas SA, Yaspo M-L.
Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments.
Nucleic Acids Res. 38(10), pp.e112 (2010).
Rogozina A, Zaychikov E, Buckle M, Heumann H, Sclavi B.
DNA melting by RNA polymerase at the T7A1 promoter precedes the rate-limiting step at 37 degrees C and results in the accumulation of an off-pathway intermediate.
Nucleic Acids Res. 37(16), pp.5390-404 (2009).
Sclavi B
Chapter 2 Opening the DNA at the Promoter; The Energetic Challenge.
in RNA Polymerases as Molecular Motors. The Royal Society of Chemistry. pp. 38-68 (2009)
Engelen S, Trojan LA, Sacquin-Mora S, Lavery R, Carbone A.
Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling.
PLoS Comput Biol. 5(1), pp.e1000267 (2009).
Ye S, Huber T, Vogel R, Sakmar TP.
FTIR analysis of GPCR activation using azido probes.
Nat Chem Biol. 5(6), pp.397 - 399 (2009).
Falconi M, Oteri F, Chillemi G, Andersen FF, Tordrup D, Oliveira CLP, Pedersen JS, Knudsen BR, Desideri A.
Deciphering the structural properties that confer stability to a DNA nanocage.
ACS Nano. 3(7), pp.1813-22 (2009).
Castelli S, Campagna A, Vassallo O, Tesauro C, Fiorani P, Tagliatesta P, Oteri F, Falconi M, Majumder HK, Desideri A.
Conjugated eicosapentaenoic acid inhibits human topoisomerase IB with a mechanism different from camptothecin.
Arch Biochem Biophys. 486(2), pp.103-10 (2009).
Salort D.
TRANSPORT EQUATIONS WITH UNBOUNDED FORCE FIELDS AND APPLICATION TO THE VLASOV–POISSON EQUATION.
Mathematical Models and Methods in Applied Sciences. 19, pp.199-228 (2009).
Maury B, Salort D, Vannier C.
Trace theorems for trees and application to the human lungs.
NHM. pp.469-500 (2009).
Horard B, Eymery A, Fourel G, Vassetzky N, Puechberty J, Roizes G, Lebrigand K, Barbry P, Laugraud A, Gautier C, Ben Simon E, Devaux F, Magdinier F, Vourc'h C, Gilson E.
Global analysis of DNA methylation and transcription of human repetitive sequences.
Epigenetics. 4(5), pp.339-50 (2009).
Carbone A, Engelen S
Information content of sets of biological sequences revisited.
in Algorithmic Bioprocesses. Springer. pp. 31–42 (2009)
Abbott JJ, Cosentino Lagomarsino M, Zhang L, Dong L, Nelson BJ.
How should microrobots swim?.
The International Journal of Robotics Research. (2009).
Carbone A, Dib L
Co-evolution and Information Signals in Biological Sequences.
in Theory and Applications of Models of Computation. LNCS 5532, Springer Berlin Heidelberg. pp. 6-17 (2009)

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