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Publications

de Carpentier F, Le Peillet J, Boisset ND, Crozet P, Lemaire SD, Danon A. Blasticidin S Deaminase: A New Efficient Selectable Marker for Chlamydomonas reinhardtii. Frontiers in Plant Science. 11, (2020).
David L, Vicedomini R, Richard H, Carbone A. Targeted domain assembly for fast functional profiling of metagenomic datasets with S3A. Bioinformatics. (2020).
O'Donnell S, Fischer G. MUM&Co: Accurate detection of all SV types through whole genome alignment. Bioinformatics (Oxford, England). 36(10), pp.3242-3243 (2020).
Yousuf M, Iuliani I, Veetil RT, Seshasayee A S N, Sclavi B, Cosentino Lagomarsino M. Early fate of exogenous promoters in E. coli. Nucleic Acids Research. (2020).
Teppa E, Nadalin F, Combet C, Zea D, David L, Carbone A. Coevolution analysis of amino-acids reveals diversified drug resistance solutions in viral sequences: a case study of hepatitis B virus. Virus Evolution. 6(1), (2020).
Corsi F, Lavery R, Laine E, Carbone A. Multiple protein-DNA interfaces unravelled by evolutionary information, physico-chemical and geometrical properties. PLoS Computational Biology. 16(2), (2020).
Laplaza R, Peccati F, Boto R, Quan C, Carbone A, Piquemal J-P, Maday Y, Contreras-García J. NCIPLOT and the analysis of noncovalent interactions using the reduced density gradient. WIREs Computational Molecular Science. (2020).
Gueudré T, Baldassi C, Pagnani A, Weigt M Predicting Interacting Protein Pairs by Coevolutionary Paralog Matching. in Protein-Protein Interaction Networks. Methods in Molecular Biology,. Edited by: Canzar S., Ringeling F. 2074, New York, NY. Humana. (2020)
Sarti E, Aleksandrova AA, Ganta SK, Yavatkar AS, Forrest LR. EncoMPASS: an online database for analyzing structure and symmetry in membrane proteins. Nucleic Acids Res. 47(D1), pp.D315 - D321 (2019).
Moussa A, Perthame B, Salort D. Backward Parabolicity, Cross-Diffusion and Turing Instability. 29(1), pp.139 - 162 (2019).
Perthame B, Ribes E, Salort D. Career plans and wage structures : a mean field game approach. Mathematics in Engineering. (2019).
Zhang Q, Brambilla E, Li R, Shi H, Lagomarsino MCosentino, Sclavi B. A decrease in transcription capacity limits growth rate upon translation inhibition. bioRxiv. (2019).
Devaux F, Thiébaut A. The regulation of iron homeostasis in the fungal human pathogen Candida glabrata. Microbiology. 165, pp.1041-1060 (2019).
Rodrigues-Pousada C, Devaux F, Caetano SM, Pimentel C, da Silva S, Cordeiro ACarolina, Amaral C. Yeast AP-1 like transcription factors (Yap) and stress response: a current overview. Microbial cell (Graz, Austria). 6(6), pp.267 - 285 (2019).
Marchand CH, Fermani S, Rossi J, Gurrieri L, Tedesco D, Henri J, Sparla F, Trost P, Lemaire SD, Zaffagnini M. Structural and Biochemical Insights into the Reactivity of Thioredoxin h1 from Chlamydomonas reinhardtii. Antioxidants (Basel). 8, (2019).

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