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Publications

Mishra B, Daruwala R-S, Zhou Y, Ugel N, Policriti A, Antoniotti M, Paxia S, Rejali M, Rudra A, Cherepinsky V, Silver N, Casey W, Piazza C, Simeoni M, Barbano P, Spivak M, Feng J, Gill O, Venkatesh M, Cheng F, Sun B, Ioniata I, Anantharaman T, E Hubbard JAlbert, Pnueli A, Harel D, Chandru V, Hariharan R, Wigler M, Park F, Lin S-C, Lazebnik Y, Winkler F, Cantor CR, Carbone A*, Gromov M. A sense of life: computational and experimental investigations with models of biochemical and evolutionary processes. OMICS. 7(3), pp.253-68 (2003).
Richard H, Nuel G. SPA: Simple web tool to assess statistical significance of DNA patterns. Nucleic Acids Res. 31(13), pp.3679-81 (2003).
Ganem C, Devaux F, Torchet C, Jacq C, Quevillon-Cheruel S, Labesse G, Facca C, Faye G. Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast. EMBO J. 22(7), pp.1588-98 (2003).
Hikkel I, Lucau-Danila A, Delaveau T, Marc P, Devaux F, Jacq C. A general strategy to uncover transcription factor properties identifies a new regulator of drug resistance in yeast. J Biol Chem. 278(13), pp.11427-32 (2003).
Kuthan M, Devaux F, Janderová B, Slaninova I, Jacq C, Palková Z. Domestication of wild Saccharomyces cerevisiae is accompanied by changes in gene expression and colony morphology. Mol Microbiol. 47(3), pp.745-54 (2003).
Wenner T, Roth V, Fischer G, Fourrier C, Aigle B, Decaris B, Leblond P. End-to-end fusion of linear deleted chromosomes initiates a cycle of genome instability in Streptomyces ambofaciens. Mol Microbiol. 50(2), pp.411-25 (2003).
Cosentino Lagomarsino M, Jona P, Bassetti B. Metachronal waves for deterministic switching two-state oscillators with hydrodynamic interaction. Phys Rev E Stat Nonlin Soft Matter Phys. 68(2 Pt 1), pp.021908 (2003).
Robelin D, Richard H, Prum B. SIC: A tool to detect short inverted segments in a biological sequence. Nucleic Acids Res. 31(13), pp.3669-71 (2003).
Lucau-Danila A, Delaveau T, Lelandais G, Devaux F, Jacq C. Competitive promoter occupancy by two yeast paralogous transcription factors controlling the multidrug resistance phenomenon. J Biol Chem. 278(52), pp.52641-50 (2003).
Cosentino Lagomarsino M, Capuani F, Lowe C P. A simulation study of the dynamics of a driven filament in an Aristotelian fluid. ArXiv Physics e-prints. (2002).
Falciatore A, Formiggini F, Bowler C Reporter genes for plant cells. in Molecular Plant Biology: A Pratical Approach. 2, pp. 265 - 283 (2002)
Carbone A*, Seeman NC. A route to fractal DNA-assembly. Natural Computing. 1, pp.469–480 (2002).
Cosentino Lagomarsino M, Bassetti B, Jona P. Rowers coupled hydrodynamically. Modeling possible mechanisms for the cooperation of cilia. The European Physical Journal B-Condensed Matter and Complex Systems. 26, pp.81–88 (2002).
Falciatore A, Bowler C. Revealing the molecular secrets of marine diatoms. Annu Rev Plant Biol. 53, pp.109-30 (2002).
Marc P, Margeot A, Devaux F, Blugeon C, Corral-Debrinski M, Jacq C. Genome-wide analysis of mRNAs targeted to yeast mitochondria. EMBO Rep. 3(2), pp.159-64 (2002).

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