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Publications

Abdollahi N, Albani A, Anthony E, Baud A, Cardon M, Clerc R, Czernecki D, Conte R, David L, Delaune A, Djerroud S, Fourgoux P, Guiglielmoni N, Laurentie J, Lehmann N, Lochard C, Montagne R, Myrodia V, Opuu V, Parey E, Polit L, Privé S, Quignot C, Ruiz-Cuevas M, Sissoko M, Sompairac N, Vallerix A, Verrecchia V, Delarue M, Guérois R, Ponty Y, Sacquin-Mora S, Carbone A, Froidevaux C, Le Crom S, Lespinet O, Weigt M, Abboud S, Bernardes JS, Bouvier G, Dequeker C, Ferré A, Fuchs P, Lelandais G, Poulain P, Richard H, Schweke H, Laine* E, Lopes* A.
Meet-U: Educating through research immersion.
PLOS Computational Biology. 14, pp.1-10 (2018).
Lagarde N, Carbone A, Sacquin-Mora S.
Hidden partners: Using cross-docking calculations to predict binding sites for proteins with multiple interactions.
PROTEINS: Structure, Function, and Bioinformatics. (2018).
Raucci R, Laine E, Carbone A.
Local Interaction Signal Analysis predicts protein-protein binding affinity.
Structure. (2018).
Figliuzzi M, Barrat-Charlaix P, Weigt M.
How Pairwise Coevolutionary Models Capture the Collective Residue Variability in Proteins?.
Molecular Biology and Evolution. pp.msy007 (2018).
Douam F, Fusil F, Enguehard M, Dib L, Nadalin F, Schwaller L, Hrebikova G, Mancip J, Mailly L, Montserret R, Ding Q, Maisse C, Carlot E, Xu K, Verhoeyen E, Baumert T, Ploss A, Carbone A*, Cosset FL*, Lavillette D*.
A protein coevolution method designed for conserved sequences uncovers critical features of the original HCV fusion mechanism and provides molecular basis for the design of effective antiviral strategies.
PLoS Pathogens. (2018).
Vakirilis N, Hebert AS, Opulente DA, Achaz G, Hittinger CTodd, Fischer G, Coon JJ, Lafontaine I.
A molecular portrait of de novo genes in yeasts.
Mol Biol Evol. 35(3), pp.631-645 (2018).
Shrestha AMS, Asai K, Frith M, Richard H.
Jointly aligning a group of DNA reads improves accuracy of identifying large deletions.
Nucleic Acids Research. 46(3), (2018).
Tian M, Ye-Lehmann S
Engineering light sensitive NMDARs.
in Methods in Molecular Biology. Edited by: Szepetowski P. and Burnashev N. John Wiley & Sons, Inc. (2018)
Tian M, Wang Q, Yuan C, Ye S
Structure and Function Studies of GPCRs by Site-Specific Incorporation of Unnatural Amino Aci.
in Topics in Medicinal Chemistry. Springer. Berlin, Heidelberg. Springer,. (2017)
Krakau S, Richard H, Marsico A.
PureCLIP: capturing target-specific protein–RNA interaction footprints from single-nucleotide CLIP-seq data.
18(1), pp.240 (2017).
Leh H, Khodr A, Bouger M-C, Sclavi B, Rimsky S, Bury-Moné S.
Bacterial-Chromatin Structural Proteins Regulate the Bimodal Expression of the Locus of Enterocyte Effacement (LEE) Pathogenicity Island in Enteropathogenic .
MBio. 8(4), (2017).
Baudin M, Cinquin B, Sclavi B, Pareau D, Lopes F.
Understanding the fundamental mechanisms of biofilms development and dispersal: BIAM (Biofilm Intensity and Architecture Measurement), a new tool for studying biofilms as a function of their architecture and fluorescence intensity.
J Microbiol Methods. 140, pp.47-57 (2017).
Bury-Moné S, Sclavi B.
Stochasticity of gene expression as a motor of epigenetics in bacteria: from individual to collective behaviors.
Res Microbiol. 168(6), pp.503-514 (2017).
Baud A, Aymé L, Gonnet F, Salard I, Gohon Y, Jolivet P, Brodolin K, Da Silva P, Giuliani A, Sclavi B, Chardot T, Mercère P, Roblin P, Daniel R.
SOLEIL shining on the solution-state structure of biomacromolecules by synchrotron X-ray footprinting at the Metrology beamline.
J Synchrotron Radiat. 24(Pt 3), pp.576-585 (2017).
Sheats J, Sclavi B, Cosentino Lagomarsino M, Cicuta P, Dorfman KD.
Role of growth rate on the orientational alignment of in a slit.
R Soc Open Sci. 4(6), pp.170463 (2017).

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