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Publications

Cosentino Lagomarsino M, Pagonabarraga I, Lowe CP. Hydrodynamic induced deformation and orientation of a microscopic elastic filament. Phys Rev Lett. 94(14), pp.148104 (2005).
Wyers F, Rougemaille M, Badis G, Rousselle J-C, Dufour M-E, Boulay J, Régnault B, Devaux F, Namane A, Séraphin B, Libri D, Jacquier A. Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell. 121(5), pp.725-37 (2005).
Cosentino Lagomarsino M, Jona P, Bassetti B. Logic backbone of a transcription network. Phys Rev Lett. 95(15), pp.158701 (2005).
Carbone A, Madden R. Insights on the evolution of metabolic networks of unicellular translationally biased organisms from transcriptomic data and sequence analysis. J Mol Evol. 61(4), pp.456-69 (2005).
Zhang X, Kolaczkowska A, Devaux F, Panwar SLata, Hallstrom TC, Jacq C, W Moye-Rowley S. Transcriptional regulation by Lge1p requires a function independent of its role in histone H2B ubiquitination. J Biol Chem. 280(4), pp.2759-70 (2005).
Ye S, Strzalka J, Churbanova IY, Zheng S, Johansson JS, J Blasie K. A model membrane protein for binding volatile anesthetics. Biophys J. 87(6), pp.4065-74 (2004).
Ye S, Strzalka JW, Discher BM, Noy D, Zheng S, P Dutton L, J Blasie K. Amphiphilic 4-helix bundles designed for biomolecular materials applications. Langmuir. 20(14), pp.5897-904 (2004).
Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuvéglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich J-M, Beyne E, Bleykasten C, Boisrame A, Boyer J, Cattolico L, Confanioleri F, de Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud J-M, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard G-F, Straub M-L, Suleau A, Swennen D, Tekaia F, Wesolowski-Louvel MICHELINE, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet J-L. Genome evolution in yeasts. Nature. 430(6995), pp.35 - 44 (2004).
Carbone A, Mao C, Constantinou PE, Ding B, Kopatsch J, Sherman WB, Seeman NC. 3D fractal DNA assembly from coding, geometry and protection. Natural Computing. 3, pp.235–252 (2004).
Carbone A, Seeman NC Molecular tiling and DNA self-assembly. in Aspects of Molecular Computing. Springer. pp. 61–83 (2004)
Váchová L, Devaux F, Kučerová H, Ricicová M, Jacq C, Palková Z. Sok2p transcription factor is involved in adaptive program relevant for long term survival of Saccharomyces cerevisiae colonies. J Biol Chem. 279(36), pp.37973-81 (2004).
Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P. yMGV: a cross-species expression data mining tool. Nucleic Acids Res. 32(Database issue), pp.D323-5 (2004).
Boyer J, Badis G, Fairhead C, Talla E, Hantraye F, Fabre E, Fischer G, Hennequin C, Koszul R, Lafontaine I, Ozier-Kalogeropoulos O, Ricchetti M, Richard G-F, Thierry A, Dujon B. Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae. Genome Biol. 5(9), pp.R72 (2004).
Lafontaine I, Fischer G, Talla E, Dujon B. Gene relics in the genome of the yeast Saccharomyces cerevisiae. Gene. 335, pp.1-17 (2004).
Koszul R, Caburet S, Dujon B, Fischer G. Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments. EMBO J. 23(1), pp.234-43 (2004).

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