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Good BH, IM Rouzine, Balick DJ, Hallatschek O, Desai MM.
Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations.
Proc Natl Acad Sci U S A. 109(13), pp.4950-5 (2012).
Karami Y, fathy M, Khakzad H, Shirazi H, Arab S
Protein structure prediction using bio-inspired algorithm: A review.
in Artificial Intelligence and Signal Processing (AISP), 2012 16th CSI International Symposium on. (2012)
Di Marino D, Oteri F, Rocca BMorozzo de, D'Annessa I, Falconi M.
Mapping multiple potential ATP binding sites on the matrix side of the bovine ADP/ATP carrier by the combined use of MD simulation and docking.
J Mol Model. 18(6), pp.2377-86 (2012).
Dib L, Carbone A.
Protein Fragments: Functional and Structural Roles of Their Coevolution Networks.
PLoS ONE. 7(11), pp.e48124 (2012).
Dhamgaye S, Bernard M, Lelandais G, Sismeiro O, Lemoine S, Coppée J-Y, Le Crom S, Prasad R, Devaux F.
RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans.
BMC Genomics. 13, pp.396 (2012).
Damet L, Cicuta GM, Kotar J, Cosentino Lagomarsino M, Cicuta P.
Hydrodynamically synchronized states in active colloidal arrays.
Soft Matter. 8, pp.8672–8678 (2012).
Bottinelli A, Bassetti B, Cosentino Lagomarsino M, Gherardi M.
Influence of homology and node age on the growth of protein-protein interaction networks.
Phys Rev E Stat Nonlin Soft Matter Phys. 86(4 Pt 1), pp.041919 (2012).
Laine E, Auclair C, Tchertanov L.
Allosteric communication across the native and mutated KIT receptor tyrosine kinase.
PLoS Comput Biol. 8(8), pp.e1002661 (2012).
Benza VG, Bassetti B, Dorfman KD, Scolari VF, Bromek K, Cicuta P, Cosentino Lagomarsino M.
Physical descriptions of the bacterial nucleoid at large scales, and their biological implications.
Rep Prog Phys. 75(7), pp.076602 (2012).
Sułkowska JI, Morcos F, Weigt M, Hwa T, Onuchic JN.
Genomics-aided structure prediction.
Proc Natl Acad Sci U S A. 109(26), pp.10340-5 (2012).
Agier N, Fischer G.
The mutational profile of the yeast genome is shaped by replication.
Mol Biol Evol. 29(3), pp.905-13 (2012).
Scolari VF, Zarei M, Osella M, Cosentino Lagomarsino M.
NuST: analysis of the interplay between nucleoid organization and gene expression.
Bioinformatics. 28(12), pp.1643-4 (2012).
Grassi L, Grilli J, Cosentino Lagomarsino M.
Large-scale dynamics of horizontal transfers.
Mob Genet Elements. 2(3), pp.163-167 (2012).
Uhlendorf J, Miermont A, Delaveau T, Charvin G, Fages F, Bottani S, Batt G, Hersen P.
Long-term model predictive control of gene expression at the population and single-cell levels.
Proc Natl Acad Sci U S A. 109(35), pp.14271-6 (2012).
Cicuta GM, Onofri E, Cosentino Lagomarsino M, Cicuta P.
Patterns of synchronization in the hydrodynamic coupling of active colloids.
Phys Rev E Stat Nonlin Soft Matter Phys. 85(1 Pt 2), pp.016203 (2012).


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