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Publications

Pedruzzi G, Rouzine IM.
Epistasis detectably alters correlations between genomic sites in a narrow parameter window.
PLOS ONE. 14, pp.1-16 (2019).
Dequeker C, Laine E, Carbone A.
Decrypting protein surfaces by combining evolution, geometry and molecular docking.
Proteins. (2019).
Annunziata R, Ritter A, Fortunato AE, Cheminant-Navarro S, Agier N, Huysman MJJ, Winge P, Bones A, Bouget F-Y, Cosentino Lagomarsino M, Bouly J-P, Falciatore A.
A bHLH-PAS protein regulates light-dependent rhythmic processes in the marine diatom "Phaeodactylum tricornutum".
PNAS. pp.271445 (2019).
Fairhead C, Fischer G, Liti G, Neuvéglise C, Schacherer J.
André Goffeau's imprinting on second generation yeast “genomologists”.
Yeast. 36(4), pp.167 - 175 (2019).
Jolivet P, Serhal K, Graf M, Eberhard S, Xu Z, Luke B, Teixeira MTeresa.
A subtelomeric region affects telomerase-negative replicative senescence in Saccharomyces cerevisiae.
Scientific Reports. 9(1), pp.1845 (2019).
Coutelier H, Xu Z.
Adaptation in replicative senescence: a risky business.
Curr Genet. (2019).
Saad C, Noé L, Richard H, Leclerc J, Buisine M-P, Touzet H, Figeac M.
DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.
19(1), pp.223 (2018).
Zhang W, Hamouri F, Feng Z, Aujard I, Ducos B, Ye S, Weiss S, Volovitch M, Vriz S, Jullien L, Bensimon D.
Control of Protein Activity and Gene Expression by Cyclofen-OH Uncaging.
Chembiochem. 19(12), pp.1232-1238 (2018).
Shrestha AMS, Frith MC, Asai K, Richard H.
Jointly aligning a group of DNA reads improves accuracy of identifying large deletions.
Nucleic acids research. 46(3), pp.e18 - e18 (2018).
Saad C, Noé L, Richard H, Leclerc J, Buisine M-P, Touzet H, Figeac M.
DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.
19(1), pp.223 (2018).
Coutelier H, Xu Z, Morisse MChenda, Lhuillier-Akakpo M, Pelet S, Charvin G, Dubrana K, Teixeira MTeresa.
Adaptation to DNA damage checkpoint in senescent telomerase-negative cells promotes genome instability.
Genes Dev. 32(23-24), pp.1499-1513 (2018).
Benchouaia M, Ripoche H, Sissoko M, Thiébaut A, Merhej J, Delaveau T, Fasseu L, Benaissa S, Lorieux G, Jourdren L, Le Crom S, Lelandais G, Corel E, Devaux F.
Comparative Transcriptomics Highlights New Features of the Iron Starvation Response in the Human Pathogen .
Front Microbiol. 9, pp.2689 (2018).
Piña-Iturbe A, Ulloa-Allendes D, Pardo-Roa C, Coronado-Arrázola I, Salazar-Echegarai FJ, Sclavi B, González PA, Bueno SM.
Comparative and phylogenetic analysis of a novel family of Enterobacteriaceae-associated genomic islands that share a conserved excision/integration module.
Sci Rep. 8(1), pp.10292 (2018).
Wurihan W, GeZi B, Brambilla E, Wang S, Sun H, Fan L, Shi Y, Sclavi B, Morigen M.
DnaA and LexA Proteins Regulate Transcription of the Gene in : The Role of DnaA in the Control of the SOS Regulon.
Front Microbiol. 9, pp.1212 (2018).
Negri M, Gherardi M, Tiana G, Cosentino Lagomarsino M.
Spontaneous domain formation in disordered copolymers as a mechanism for chromosome structuring.
Soft Matter. 14(29), pp.6128 - 6136 (2018).

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