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Publications

Molinelli EJ, Korkut A, Wang W, Miller ML, Gauthier NP, Jing X, Kaushik P, He Q, Mills G, Solit DB, Pratilas CA, Weigt M, Braunstein A, Pagnani A, Zecchina R, Sander C. Perturbation biology: inferring signaling networks in cellular systems. PLoS Comput Biol. 9(12), pp.e1003290 (2013).
Huysman MJJ, Fortunato AE, Matthijs M, Costa BSchellenbe, Vanderhaeghen R, Van den Daele H, Sachse M, Inzé D, Bowler C, Kroth PG, Wilhelm C, Falciatore A, Vyverman W, De Veylder L. AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum). Plant Cell. 25(1), pp.215-28 (2013).
Long Z, Nugent E, Javer A, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD. Microfluidic chemostat for measuring single cell dynamics in bacteria. Lab Chip. 13(5), pp.947-54 (2013).
Hanein S, Garcia M, Fares-Taie L, Serre V, De Keyzer Y, Delaveau T, Perrault I, Delphin N, Gerber S, Schmitt A, Masse J-M, Munnich A, Kaplan J, Devaux F, Rozet J-M. TMEM126A is a mitochondrial located mRNA (MLR) protein of the mitochondrial inner membrane. Biochim Biophys Acta. 1830(6), pp.3719-33 (2013).
Lopes A, Sacquin-Mora S, Dimitrova V, Laine E, Ponty Y, Carbone A. Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information. PLoS Comput Biol. 9(12), pp.e1003369 (2013).
Mouaikel J, Causse SZ, Rougemaille M, Daubenton-Carafa Y, Blugeon C, Lemoine S, Devaux F, Darzacq X, Libri D. High-frequency promoter firing links THO complex function to heavy chromatin formation. Cell Rep. 5(4), pp.1082-94 (2013).
Agier N, Romano OMaria, Touzain F, Cosentino Lagomarsino M, Fischer G. The spatiotemporal program of replication in the genome of Lachancea kluyveri. Genome Biol Evol. 5(2), pp.370-88 (2013).
Osella M, Cosentino Lagomarsino M. Growth-rate-dependent dynamics of a bacterial genetic oscillator. Phys Rev E Stat Nonlin Soft Matter Phys. 87(1), pp.012726 (2013).
Srinivasan R, Chandraprakash D, Krishnamurthi R, Singh P, Scolari VF, Krishna S, Seshasayee ASai Narain. Genomic analysis reveals epistatic silencing of "expensive" genes in Escherichia coli K-12. Mol Biosyst. 9(8), pp.2021-33 (2013).
Gherardi M, Mandrà S, Bassetti B, Cosentino Lagomarsino M. Evidence for soft bounds in Ubuntu package sizes and mammalian body masses. Proc Natl Acad Sci U S A. 110(52), pp.21054-8 (2013).
Ekeberg M, Lövkvist C, Lan Y, Weigt M, Aurell E. Improved contact prediction in proteins: using pseudolikelihoods to infer Potts models. Phys Rev E Stat Nonlin Soft Matter Phys. 87(1), pp.012707 (2013).
Bedhomme M, Adamo M, Marchand CH, Couturier J, Rouhier N, Lemaire SD, Zaffagnini M, Trost P Glutathionylation of cytosolic glyceraldehyde-3-phosphate dehydrogenase from the model plant Arabidopsis thaliana is reversed by both glutaredoxins and thioredoxins in vitro. (2012)
Zaffagnini M, Bedhomme M, Marchand CH, Couturier JR, Gao XH, Rouhier N, Trost P, Lemaire SD. Glutaredoxin s12: unique properties for redox signaling. Antioxid Redox Signal. 16, pp.17-32 (2012).
Zaffagnini M, Bedhomme M, Marchand CH, Morisse S, Trost P, Lemaire SD. Redox regulation in photosynthetic organisms: focus on glutathionylation. Antioxid Redox Signal. 16, pp.567-86 (2012).
Perez-Perez ME, Lemaire SD, Crespo JL. Reactive oxygen species and autophagy in plants and algae. Plant Physiol. 160, pp.156-64 (2012).

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