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Publications

Cosentino Lagomarsino M, Jona P, Bassetti B. Logic backbone of a transcription network. Phys Rev Lett. 95(15), pp.158701 (2005).
Carbone A, Madden R. Insights on the evolution of metabolic networks of unicellular translationally biased organisms from transcriptomic data and sequence analysis. J Mol Evol. 61(4), pp.456-69 (2005).
Zumdieck A, Cosentino Lagomarsino M, Tanase C, Kruse K, Mulder B, Dogterom M, Jülicher F. Continuum description of the cytoskeleton: ring formation in the cell cortex. Phys Rev Lett. 95(25), pp.258103 (2005).
Falciatore A, Merendino L, Barneche F, Ceol M, Meskauskiene R, Apel K, Rochaix J-D. The FLP proteins act as regulators of chlorophyll synthesis in response to light and plastid signals in Chlamydomonas. Genes Dev. 19(1), pp.176-87 (2005).
Lucau-Danila A, Lelandais G, Kozovska Z, Tanty V, Delaveau T, Devaux F, Jacq C. Early expression of yeast genes affected by chemical stress. Mol Cell Biol. 25(5), pp.1860-8 (2005).
Ye S, Strzalka JW, Discher BM, Noy D, Zheng S, P Dutton L, J Blasie K. Amphiphilic 4-helix bundles designed for biomolecular materials applications. Langmuir. 20(14), pp.5897-904 (2004).
Ye S, Strzalka J, Churbanova IY, Zheng S, Johansson JS, J Blasie K. A model membrane protein for binding volatile anesthetics. Biophys J. 87(6), pp.4065-74 (2004).
Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuvéglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich J-M, Beyne E, Bleykasten C, Boisrame A, Boyer J, Cattolico L, Confanioleri F, de Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud J-M, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard G-F, Straub M-L, Suleau A, Swennen D, Tekaia F, Wesolowski-Louvel MICHELINE, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet J-L. Genome evolution in yeasts. Nature. 430(6995), pp.35 - 44 (2004).
Carbone A, Mao C, Constantinou PE, Ding B, Kopatsch J, Sherman WB, Seeman NC. 3D fractal DNA assembly from coding, geometry and protection. Natural Computing. 3, pp.235–252 (2004).
Carbone A, Seeman NC Molecular tiling and DNA self-assembly. in Aspects of Molecular Computing. Springer. pp. 61–83 (2004)
Boyer J, Badis G, Fairhead C, Talla E, Hantraye F, Fabre E, Fischer G, Hennequin C, Koszul R, Lafontaine I, Ozier-Kalogeropoulos O, Ricchetti M, Richard G-F, Thierry A, Dujon B. Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae. Genome Biol. 5(9), pp.R72 (2004).
Lafontaine I, Fischer G, Talla E, Dujon B. Gene relics in the genome of the yeast Saccharomyces cerevisiae. Gene. 335, pp.1-17 (2004).
Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P. yMGV: a cross-species expression data mining tool. Nucleic Acids Res. 32(Database issue), pp.D323-5 (2004).
Koszul R, Caburet S, Dujon B, Fischer G. Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments. EMBO J. 23(1), pp.234-43 (2004).
Paiva S, Devaux F, Barbosa S, Jacq C, Casal M. Ady2p is essential for the acetate permease activity in the yeast Saccharomyces cerevisiae. Yeast. 21(3), pp.201-10 (2004).

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