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Publications

Couvé S, Ladroue C, Laine E, Mahtouk K, Guégan J, Gad S, Le Jeune H, Le Gentil M, Nuel G, Kim WY, Lecomte B, Pagès J-C, Collin C, Lasne F, Benusiglio PR, de Paillerets BBressac-, Feunteun J, Lazar V, Gimenez-Roqueplo A-P, Mazure NM, Dessen P, Tchertanov L, Mole DR, Kaelin W, Ratcliffe P, Richard S, Gardie B.
Genetic Evidence of a Precisely Tuned Dysregulation in the Hypoxia Signaling Pathway during Oncogenesis.
Cancer Res. 74(22), pp.6554-64 (2014).
Schulz MH, Weese D, Holtgrewe M, Dimitrova V, Niu S, Reinert K, Richard H.
Fiona: a parallel and automatic strategy for read error correction.
Bioinformatics. 30(17), pp.i356-63 (2014).
Osella M, Nugent E, Cosentino Lagomarsino M.
Concerted control of Escherichia coli cell division.
Proc Natl Acad Sci U S A. 111(9), pp.3431-5 (2014).
Gomes PDa Silva F, Panel N, Laine E, Pascutti PGelado, Solary E, Tchertanov L.
Differential Effects of CSF-1R D802V and KIT D816V Homologous Mutations on Receptor Tertiary Structure and Allosteric Communication.
PLOS ONE. 9(5), (2014).
Carbone A
Extracting Coevolving Characters from a Tree of Species.
in Discrete and Topological Models in Molecular Biology. Springer Berlin Heidelberg. pp. 45-65 (2014)
Mathelier A, Carbone A.
Predicted human structural clusters of miRNAs target cancer genes.
Atlas Genet Cytogenet Oncol Haematol. (2014).
de Beauchêne IChauvot, Allain A, Panel N, Laine E, Trouvé A, Dubreuil P, Tchertanov L.
Hotspot mutations in KIT receptor differentially modulate its allosterically coupled conformational dynamics: impact on activation and drug sensitivity.
PLoS Comput Biol. 10(7), pp.e1003749 (2014).
Mirauta B, Nicolas P, Richard H.
Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models.
Bioinformatics. 30(10), pp.1409-16 (2014).
Oliveri P, Fortunato AE, Petrone L, Ishikawa-Fujiwara T, Kobayashi Y, Todo T, Antonova O, Arboleda E, Zantke J, Tessmar-Raible K, Falciatore A.
The Cryptochrome/Photolyase Family in aquatic organisms.
Mar Genomics. 14, pp.23-37 (2014).
Mota S, Vieira N, Barbosa S, Delaveau T, Torchet C, Le Saux A, Garcia M, Pereira A, Lemoine S, Coulpier F, Darzacq X, Benard L, Casal M, Devaux F, Paiva S.
Role of the DHH1 gene in the regulation of monocarboxylic acids transporters expression in Saccharomyces cerevisiae.
PLoS One. 9(11), pp.e111589 (2014).
Annaluru N, Muller H, Mitchell LA, Ramalingam S, Stracquadanio G, Richardson SM, Dymond JS, Kuang Z, Scheifele LZ, Cooper EM, Cai Y, Zeller K, Agmon N, Han JS, Hadjithomas M, Tullman J, Caravelli K, Cirelli K, Guo Z, London V, Yeluru A, Murugan S, Kandavelou K, Agier N, Fischer G, Yang K, J Martin A, Bilgel M, Bohutski P, Boulier KM, Capaldo BJ, Chang J, Charoen K, Choi WJin, Deng P, DiCarlo JE, Doong J, Dunn J, Feinberg JI, Fernandez C, Floria CE, Gladowski D, Hadidi P, Ishizuka I, Jabbari J, Lau CYL, Lee PA, Li S, Lin D, Linder ME, Ling J, Liu J, Liu J, London M, Ma H, Mao J, McDade JE, McMillan A, Moore AM, Oh WChan, Ouyang Y, Patel R, Paul M, Paulsen LC, Qiu J, Rhee A, Rubashkin MG, Soh IY, Sotuyo NE, Srinivas V, Suarez A, Wong A, Wong R, Xie WRose, Xu Y, Yu AT, Koszul R, Bader JS, Boeke JD, Chandrasegaran S.
Total synthesis of a functional designer eukaryotic chromosome.
Science. 344(6179), pp.55-8 (2014).
Daboussi F, Leduc S, Maréchal A, Dubois G, Guyot V, Perez-Michaut C, Amato A, Falciatore A, Juillerat A, Beurdeley M, Voytas DF, Cavarec L, Duchateau P.
Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology.
Nat Commun. 5, pp.3831 (2014).
Thacker VV, Bromek K, Meijer B, Kotar J, Sclavi B, Cosentino Lagomarsino M, Keyser UF, Cicuta P.
Bacterial nucleoid structure probed by active drag and resistive pulse sensing.
Integr Biol (Camb). 6(2), pp.184-91 (2014).
Raible F, Falciatore A.
It's about time: rhythms as a new dimension of molecular marine research.
Mar Genomics. 14, pp.1-2 (2014).
Rogato A, Richard H, Sarazin A, Voss B, Cheminant Navarro S, Champeimont R, Navarro L, Carbone A, Hess WR, Falciatore A.
The diversity of small non-coding RNAs in the diatom Phaeodactylum tricornutum.
BMC Genomics. 15, pp.698 (2014).

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