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Publications

Micali G, Grilli J, Marchi J, Osella M, Cosentino Lagomarsino M.
Dissecting the Control Mechanisms for DNA Replication and Cell Division in E. coli.
Cell Rep. 25(3), pp.761-771.e4 (2018).
Grilli J, Cadart C, Micali G, Osella M, Cosentino Lagomarsino M.
The Empirical Fluctuation Pattern of Division Control.
Front Microbiol. 9, pp.1541 (2018).
Karami Y, Bitard-Feildel T, Laine E, Carbone A.
"Infostery” analysis of short molecular dynamics simulations identifies highly sensitive residues and predicts deleterious mutations.
Scientific Reports. 8(1), (2018).
Briquet S, Ourimi A, Pionneau C, Bernardes JS, Carbone A, Chardonnet S, Vaquero C.
Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation.
PLoS One. (2018).
Rouzine* IM, Rozhnova G.
Antigenic evolution of viruses in host populations.
PLoS Pathogens. 14, pp.e1007291 (2018).
Pedruzzi G, Barlukova A, Rouzine* IM.
Evolutionary footprint of epistasis.
PLOS Computational Biology. 14, pp.e1006426 (2018).
Muller H, Scolari VF, Agier N, le Piazza A, Thierry A, Mercy G, Descorps-Declere S, Lazar-Stefanita L, Espéli O, Llorente B, Fischer G, Mozziconacci J, Koszul R.
Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi-C.
Mol Syst Biol. 14(7), pp.e8293 (2018).
Ugarte A, Vicedomini R, Bernardes JS, Carbone A.
A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling.
Microbiome. (2018).
Agier N, Delmas S, Zhang Q, Fleiss A, Jaszczyszyn Y, van Dijk E, Thermes C, Weigt M, Cosentino Lagomarsino M, Fischer G.
The evolution of the temporal program of genome replication.
Nat Commun. 9(1), pp.2199 (2018).
Taddei L, Chukhutsina V, Lepetit B, Stella GR, Bassi R, van Amerongen H, Bouly J-P, Jaubert M, Finazzi G, Falciatore A.
Dynamic changes between two LHCX-related energy quenching sites control diatom photoacclimation.
Plant Physiology. (2018).
Rouviere JO, Bulfoni M, Tuck A, Cosson B, Devaux F, Palancade B.
A SUMO-dependent feedback loop senses and controls the biogenesis of nuclear pore subunits.
Nat Commun. 9(1), pp.1665 (2018).
Abdollahi N, Albani A, Anthony E, Baud A, Cardon M, Clerc R, Czernecki D, Conte R, David L, Delaune A, Djerroud S, Fourgoux P, Guiglielmoni N, Laurentie J, Lehmann N, Lochard C, Montagne R, Myrodia V, Opuu V, Parey E, Polit L, Privé S, Quignot C, Ruiz-Cuevas M, Sissoko M, Sompairac N, Vallerix A, Verrecchia V, Delarue M, Guérois R, Ponty Y, Sacquin-Mora S, Carbone A, Froidevaux C, Le Crom S, Lespinet O, Weigt M, Abboud S, Bernardes JS, Bouvier G, Dequeker C, Ferré A, Fuchs P, Lelandais G, Poulain P, Richard H, Schweke H, Laine* E, Lopes* A.
Meet-U: Educating through research immersion.
PLOS Computational Biology. 14, pp.1-10 (2018).
Lagarde N, Carbone A, Sacquin-Mora S.
Hidden partners: Using cross-docking calculations to predict binding sites for proteins with multiple interactions.
PROTEINS: Structure, Function, and Bioinformatics. (2018).
Raucci R, Laine E, Carbone A.
Local Interaction Signal Analysis predicts protein-protein binding affinity.
Structure. (2018).
Figliuzzi M, Barrat-Charlaix P, Weigt M.
How Pairwise Coevolutionary Models Capture the Collective Residue Variability in Proteins?.
Molecular Biology and Evolution. pp.msy007 (2018).

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