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Publications

Marchand CH, Fermani S, Rossi J, Gurrieri L, Tedesco D, Henri J, Sparla F, Trost P, Lemaire SD, Zaffagnini M.
Structural and Biochemical Insights into the Reactivity of Thioredoxin h1 from Chlamydomonas reinhardtii.
Antioxidants (Basel). 8, (2019).
de Carpentier F, Lemaire SD, Danon A.
When Unity Is Strength: The Strategies Used by Chlamydomonas to Survive Environmental Stresses.
Cells. 8, (2019).
Reimer JM, Eivaskhani M, Harb I, Guarné A, Weigt M, T. Schmeing M.
Structures of a dimodular nonribosomal peptide synthetase reveal conformational flexibility.
Science. 366, (2019).
Rodriguez-Horta E, Barrat-Charlaix P, Weigt M.
Toward Inferring Potts Models for Phylogenetically Correlated Sequence Data.
Entropy. 21, pp.1090 (2019).
Croce G, Gueudré T, Cuevas MVirginia R, Keidel V, Figliuzzi M, Szurmant H, Weigt M.
A multi-scale coevolutionary approach to predict interactions between protein domains.
PLOS Computational BiologyPLOS Computational Biology. 15(10), pp.e1006891 - (2019).
Lensink MF, Brysbaert G, Nadzirin N, Velankar S, Chaleil RAG, Gerguri T, Bates PA, Laine E, Carbone A, Grudinin S, Kong R, Liu R-R, Xu X-M, Shi H, Chang S, Eisenstein M, Karczynska A, Czaplewski C, Lubecka E, Lipska A, Krupa P, Mozolewska M, Golon Ł, Samsonov S, Liwo A, Crivelli S, Pagès G, Karasikov M, Kadukova M, Yan Y, Huang S-Y, Rosell M, Rodríguez-Lumbreras LAngel, Romero-Durana M, Díaz-Bueno L, Fernandez-Recio J, Christoffer C, Terashi G, Shin W-H, Aderinwale T, Subraman SRaghavendr, Kihara D, Kozakov D, Vajda S, Porter K, Padhorny D, Desta I, Beglov D, Ignatov M, Kotelnikov S, Moal IH, Ritchie DW, de Beauchêne IChauvot, Maigret B, Devignes M-D, Echartea MElisa Ruiz, Barradas-Bautista D, Cao Z, Cavallo L, Oliva R, Cao Y, Shen Y, Baek M, Park T, Woo H, Seok C, Braitbard M, Bitton L, Scheidman-Duhovny D, DapkŪnas J, Olechnovič K, Venclovas Č, Kundrotas PJ, Belkin S, Chakravarty D, Badal VD, Vakser IA, Vreven T, Vangaveti S, Borrman T, et al..
Blind prediction of homo- and hetero- protein complexes: The CASP13-CAPRI experiment.
Proteins: Structure, Function, and BioinformaticsProteins: Structure, Function, and BioinformaticsProteins. (ja), (2019).
Marmier G, Weigt M, Bitbol A-F.
Phylogenetic correlations can suffice to infer protein partners from sequences.
PLOS Computational BiologyPLOS Computational Biology. 15(10), pp.e1007179 - (2019).
Perthame B, Salort D.
Derivation of a voltage density equation from a voltage-conductance kinetic model for networks of Integrate-and-Fire neurons.
Communication in Mathematical sciences. (2019).
Nguyen TN, Clairambault J, Jaffredo T, Perthame B, Salort D.
Adaptive dynamics of hematopoietic stem cells and their supporting stroma: A model and mathematical analysis.
Mathematical Biosciences and Engineering. (2019).
Laine E, Karami Y, Carbone A.
GEMME: A Simple and Fast Global Epistatic Model Predicting Mutational Effects.
Molecular Biology and Evolution. (2019).
Shimagaki K, Weigt M.
Selection of sequence motifs and generative Hopfield-Potts models for protein families.
Phys. Rev. E. 100, pp.032128 (2019).
Cáceres MJ, Roux P, Salort D, Schneider R.
Global-in-time classical solutions and qualitative properties for the NNLIF neuron model with synaptic delay.
Communication in Partial Differential Equations. (2019).
Fleiss A, O'Donnell S, Fournier T, Lu W, Agier N, Delmas S, Schacherer J, Fischer G.
Reshuffling yeast chromosomes with CRISPR/Cas9.
PLOS Genetics. 15, pp.1-26 (2019).
Xu Z, Teixeira MTeresa.
The many types of heterogeneity in replicative senescence.
Yeast. (ja), (2019).
Pedruzzi G, Rouzine IM.
Epistasis detectably alters correlations between genomic sites in a narrow parameter window.
PLOS ONE. 14, pp.1-16 (2019).

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