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Publications

Biocca S, Arcangeli T, Tagliaferri E, Testa B, Vindigni G, Oteri F, Giorgi A, Iacovelli F, Novelli G, Desideri A, Falconi M.
Simulative and experimental investigation on the cleavage site that generates the soluble human LOX-1.
Arch Biochem Biophys. 540(1-2), pp.9-18 (2013).
Llopis I, Pagonabarraga I, Cosentino Lagomarsino M, Lowe CP.
Cooperative motion of intrinsic and actuated semiflexible swimmers.
Phys. Rev. E. 87, pp.032720 (2013).
Perthame B, Salort D.
On a voltage-conductance kinetic system for integrate and fire neural networks.
ArXiv e-prints. (2013).
Jezequel N, Cosentino Lagomarsino M, Heslot F, Thomen P.
Long-Term Diversity and Genome Adaptation of Acinetobacter baylyi in a Minimal-Medium Chemostat.
Genome Biology and Evolution. 5, pp.87-97 (2013).
Cocco S, Monasson R, Weigt M
Inference of Hopfield-Potts patterns from covariation in protein families: calculation and statistical error bars.
in Journal of Physics: Conference Series. 473, IOP Publishing. p. 012010 (2013)
Szurmant H, Weigt M
Genetic covariance.
in Brenner's Encyclopedia of Genetics, 2nd edition. (2013)
Drillon G, Carbone A, Fischer G.
Combinatorics of chromosomal rearrangements based on synteny blocks and synteny packs.
Journal of Logic and Computation. 23, pp.815–838 (2013).
Laine E, Carbone A
Identification of Protein Interaction Partners from Shape Complementarity Molecular Cross-Docking.
in IEEE International Conference on Image Analysis and Processing (ICIAP) 2013 Workshops, LNCS 8158. Springer. pp. 318–325 (2013)
Mirauta B, Nicolas P, Richard H
Pardiff: Inference of Differential Expression at Base-Pair Level from RNA-Seq Experiments.
in IEEE International Conference on Image Analysis and Processing (ICIAP) 2013 Workshops, LNCS 8158. Springer. pp. 418–427 (2013)
Gherardi M, Mandrà S, Bassetti B, Cosentino Lagomarsino M.
Evidence for soft bounds in Ubuntu package sizes and mammalian body masses.
Proc Natl Acad Sci U S A. 110(52), pp.21054-8 (2013).
Zarei M, Sclavi B, Cosentino Lagomarsino M.
Gene silencing and large-scale domain structure of the E. coli genome.
Mol Biosyst. 9(4), pp.758-67 (2013).
Javer A, Long Z, Nugent E, Grisi M, Siriwatwetchakul K, Dorfman KD, Cicuta P, Cosentino Lagomarsino M.
Short-time movement of E. coli chromosomal loci depends on coordinate and subcellular localization.
Nat Commun. 4, pp.3003 (2013).
Lepetit B, Sturm S, Rogato A, Gruber A, Sachse M, Falciatore A, Kroth PG, Lavaud J.
High light acclimation in the secondary plastids containing diatom Phaeodactylum tricornutum is triggered by the redox state of the plastoquinone pool.
Plant Physiol. 161(2), pp.853-65 (2013).
Mathelier A, Carbone A.
Large scale chromosomal mapping of human microRNA structural clusters.
Nucleic Acids Res. 41(8), pp.4392-408 (2013).
Lopes A, Sacquin-Mora S, Dimitrova V, Laine E, Ponty Y, Carbone A.
Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information.
PLoS Comput Biol. 9(12), pp.e1003369 (2013).

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