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Publications

Mathelier A, Carbone A.
Large scale chromosomal mapping of human microRNA structural clusters.
Nucleic Acids Res. 41(8), pp.4392-408 (2013).
Lopes A, Sacquin-Mora S, Dimitrova V, Laine E, Ponty Y, Carbone A.
Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information.
PLoS Comput Biol. 9(12), pp.e1003369 (2013).
Huysman MJJ, Fortunato AE, Matthijs M, Costa BSchellenbe, Vanderhaeghen R, Van den Daele H, Sachse M, Inzé D, Bowler C, Kroth PG, Wilhelm C, Falciatore A, Vyverman W, De Veylder L.
AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum).
Plant Cell. 25(1), pp.215-28 (2013).
Hanein S, Garcia M, Fares-Taie L, Serre V, De Keyzer Y, Delaveau T, Perrault I, Delphin N, Gerber S, Schmitt A, Masse J-M, Munnich A, Kaplan J, Devaux F, Rozet J-M.
TMEM126A is a mitochondrial located mRNA (MLR) protein of the mitochondrial inner membrane.
Biochim Biophys Acta. 1830(6), pp.3719-33 (2013).
Molinelli EJ, Korkut A, Wang W, Miller ML, Gauthier NP, Jing X, Kaushik P, He Q, Mills G, Solit DB, Pratilas CA, Weigt M, Braunstein A, Pagnani A, Zecchina R, Sander C.
Perturbation biology: inferring signaling networks in cellular systems.
PLoS Comput Biol. 9(12), pp.e1003290 (2013).
Long Z, Nugent E, Javer A, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD.
Microfluidic chemostat for measuring single cell dynamics in bacteria.
Lab Chip. 13(5), pp.947-54 (2013).
Zorman S, Seitz H, Sclavi B, Strick TR.
Topological characterization of the DnaA-oriC complex using single-molecule nanomanipuation.
Nucleic Acids Res. 40(15), pp.7375-83 (2012).
Xu Z, Prigent S.
Guide du mémoire et de la thèse en sciences.
(2012).
Good BH, IM Rouzine, Balick DJ, Hallatschek O, Desai MM.
Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations.
Proc Natl Acad Sci U S A. 109(13), pp.4950-5 (2012).
Karami Y, fathy M, Khakzad H, Shirazi H, Arab S
Protein structure prediction using bio-inspired algorithm: A review.
in Artificial Intelligence and Signal Processing (AISP), 2012 16th CSI International Symposium on. (2012)
Di Marino D, Oteri F, Rocca BMorozzo de, D'Annessa I, Falconi M.
Mapping multiple potential ATP binding sites on the matrix side of the bovine ADP/ATP carrier by the combined use of MD simulation and docking.
J Mol Model. 18(6), pp.2377-86 (2012).
Dib L, Carbone A.
Protein Fragments: Functional and Structural Roles of Their Coevolution Networks.
PLoS ONE. 7(11), pp.e48124 (2012).
Dhamgaye S, Bernard M, Lelandais G, Sismeiro O, Lemoine S, Coppée J-Y, Le Crom S, Prasad R, Devaux F.
RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans.
BMC Genomics. 13, pp.396 (2012).
Damet L, Cicuta GM, Kotar J, Cosentino Lagomarsino M, Cicuta P.
Hydrodynamically synchronized states in active colloidal arrays.
Soft Matter. 8, pp.8672–8678 (2012).
Agier N, Fischer G.
The mutational profile of the yeast genome is shaped by replication.
Mol Biol Evol. 29(3), pp.905-13 (2012).

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