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Publications

Hanein S, Garcia M, Fares-Taie L, Serre V, De Keyzer Y, Delaveau T, Perrault I, Delphin N, Gerber S, Schmitt A, Masse J-M, Munnich A, Kaplan J, Devaux F, Rozet J-M.
TMEM126A is a mitochondrial located mRNA (MLR) protein of the mitochondrial inner membrane.
Biochim Biophys Acta. 1830(6), pp.3719-33 (2013).
Molinelli EJ, Korkut A, Wang W, Miller ML, Gauthier NP, Jing X, Kaushik P, He Q, Mills G, Solit DB, Pratilas CA, Weigt M, Braunstein A, Pagnani A, Zecchina R, Sander C.
Perturbation biology: inferring signaling networks in cellular systems.
PLoS Comput Biol. 9(12), pp.e1003290 (2013).
Long Z, Nugent E, Javer A, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD.
Microfluidic chemostat for measuring single cell dynamics in bacteria.
Lab Chip. 13(5), pp.947-54 (2013).
Srinivasan R, Chandraprakash D, Krishnamurthi R, Singh P, Scolari VF, Krishna S, Seshasayee ASai Narain.
Genomic analysis reveals epistatic silencing of "expensive" genes in Escherichia coli K-12.
Mol Biosyst. 9(8), pp.2021-33 (2013).
Ekeberg M, Lövkvist C, Lan Y, Weigt M, Aurell E.
Improved contact prediction in proteins: using pseudolikelihoods to infer Potts models.
Phys Rev E Stat Nonlin Soft Matter Phys. 87(1), pp.012707 (2013).
Mouaikel J, Causse SZ, Rougemaille M, Daubenton-Carafa Y, Blugeon C, Lemoine S, Devaux F, Darzacq X, Libri D.
High-frequency promoter firing links THO complex function to heavy chromatin formation.
Cell Rep. 5(4), pp.1082-94 (2013).
Osella M, Cosentino Lagomarsino M.
Growth-rate-dependent dynamics of a bacterial genetic oscillator.
Phys Rev E Stat Nonlin Soft Matter Phys. 87(1), pp.012726 (2013).
Cocco S, Monasson R, Weigt M.
From principal component to direct coupling analysis of coevolution in proteins: low-eigenvalue modes are needed for structure prediction.
PLoS Comput Biol. 9(8), pp.e1003176 (2013).
Agier N, Romano OMaria, Touzain F, Cosentino Lagomarsino M, Fischer G.
The spatiotemporal program of replication in the genome of Lachancea kluyveri.
Genome Biol Evol. 5(2), pp.370-88 (2013).
Gherardi M, Mandrà S, Bassetti B, Cosentino Lagomarsino M.
Evidence for soft bounds in Ubuntu package sizes and mammalian body masses.
Proc Natl Acad Sci U S A. 110(52), pp.21054-8 (2013).
Zarei M, Sclavi B, Cosentino Lagomarsino M.
Gene silencing and large-scale domain structure of the E. coli genome.
Mol Biosyst. 9(4), pp.758-67 (2013).
Javer A, Long Z, Nugent E, Grisi M, Siriwatwetchakul K, Dorfman KD, Cicuta P, Cosentino Lagomarsino M.
Short-time movement of E. coli chromosomal loci depends on coordinate and subcellular localization.
Nat Commun. 4, pp.3003 (2013).
Lepetit B, Sturm S, Rogato A, Gruber A, Sachse M, Falciatore A, Kroth PG, Lavaud J.
High light acclimation in the secondary plastids containing diatom Phaeodactylum tricornutum is triggered by the redox state of the plastoquinone pool.
Plant Physiol. 161(2), pp.853-65 (2013).
Mathelier A, Carbone A.
Large scale chromosomal mapping of human microRNA structural clusters.
Nucleic Acids Res. 41(8), pp.4392-408 (2013).
Lopes A, Sacquin-Mora S, Dimitrova V, Laine E, Ponty Y, Carbone A.
Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information.
PLoS Comput Biol. 9(12), pp.e1003369 (2013).

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