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Publications

Falconi M, Oteri F, Di Palma F, Pandey S, Battistoni A, Desideri A.
Structural-dynamical investigation of the ZnuA histidine-rich loop: involvement in zinc management and transport.
J Comput Aided Mol Des. 25(2), pp.181-94 (2011).
Ceci P, Di Cecca G, Falconi M, Oteri F, Zamparelli C, Chiancone E.
Effect of the charge distribution along the "ferritin-like" pores of the proteins from the Dps family on the iron incorporation process.
J Biol Inorg Chem. 16(6), pp.869-80 (2011).
Ciccacci C, Falconi M, Paolillo N, Oteri F, Forte V, Novelli G, Desideri A, Borgiani P.
Characterization of a novel CYP2C9 gene mutation and structural bioinformatic protein analysis in a warfarin hypersensitive patient.
Pharmacogenet Genomics. 21(6), pp.344-6 (2011).
Carbone A, Dib L.
Co-evolution and information signals in biological sequences.
Theoretical Computer Science. 412, pp.2486 - 2495 (2011).
Procaccini A, Lunt B, Szurmant H, Hwa T, Weigt M.
Dissecting the Specificity of Protein-Protein Interaction in Bacterial Two-Component Signaling: Orphans and Crosstalks.
Rattray M (Eds.). PLoS One. 6, pp.e19729 (2011).
Goudot C, Etchebest C, Devaux F, Lelandais G.
The reconstruction of condition-specific transcriptional modules provides new insights in the evolution of yeast AP-1 proteins.
PLoS One. 6(6), pp.e20924 (2011).
Drillon G, Fischer G.
Comparative study on synteny between yeasts and vertebrates.
C R Biol. 334(8-9), pp.629-38 (2011).
Pakdaman K, Perthame B, Salort D.
Relaxation and self-sustained oscillations in the time elapsed neuron network model.
ArXiv e-prints. (2011).
Mäder U, Nicolas P, Richard H, Bessières P, Aymerich S.
Comprehensive identification and quantification of microbial transcriptomes by genome-wide unbiased methods.
Curr Opin Biotechnol. 22(1), pp.32-41 (2011).
Morcos F, Pagnani A, Lunt B, Bertolino A, Marks DS, Sander C, Zecchina R, Onuchic JN, Hwa T, Weigt M.
Direct-coupling analysis of residue coevolution captures native contacts across many protein families.
Proceedings of the National Academy of Sciences. 108, pp.E1293-E1301 (2011).
Bernardes JS, Carbone A, Zaverucha G.
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models.
BMC Bioinformatics. 12, pp.83 (2011).
Scolari VF, Bassetti B, Sclavi B, Cosentino Lagomarsino M.
Gene clusters reflecting macrodomain structure respond to nucleoid perturbations.
Mol Biosyst. 7(3), pp.878-88 (2011).
Lelandais G, Goudot C, Devaux F.
The evolution of gene expression regulatory networks in yeasts.
C R Biol. 334(8-9), pp.655-61 (2011).
Bruot N, Damet L, Kotar J, Cicuta P, Cosentino Lagomarsino M.
Noise and synchronization of a single active colloid.
Phys Rev Lett. 107(9), pp.094101 (2011).
Grant MAA, Saggioro C, Ferrari U, Bassetti B, Sclavi B, Cosentino Lagomarsino M.
DnaA and the timing of chromosome replication in Escherichia coli as a function of growth rate.
BMC Syst Biol. 5, pp.201 (2011).

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