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Publications

Paiva S, Devaux F, Barbosa S, Jacq C, Casal M. Ady2p is essential for the acetate permease activity in the yeast Saccharomyces cerevisiae. Yeast. 21(3), pp.201-10 (2004).
IM Rouzine, F McKenzie E. Link between immune response and parasite synchronization in malaria. Proc Natl Acad Sci U S A. 100(6), pp.3473-8 (2003).
IM Rouzine, Wakeley J, Coffin JM. The solitary wave of asexual evolution. Proc Natl Acad Sci U S A. 100(2), pp.587-92 (2003).
Ye S, Strzalka J, Chen X, Moser CC, P. Dutton L, J. Blasie K. Assembly of a Vectorially Oriented Four-Helix Bundle at the Air/Water Interface via Directed Electrostatic Interactions. LangmuirLangmuir. 19(5), pp.1515 - 1521 (2003).
Bourgine P, Carbone A, Gromov M, Képès F (Eds.)Macromolecular Interplay and Traffic on DNA. ComPlexUs. Basel. S. Karger AG. (2003).
Bourgine P, Carbone A, Gromov M, Képès F (Eds.)Macromolecular Networks, a collection of articles on the theme. ComPlexUs. Kluwer. (2003).
Carbone A Cooperativity and symmetry at biological scales. in GROUP-24: Physical and Mathematical Aspects of Symmetries (Proceedings of the 24th International Colloquium on Group Theoretical Methods in Physics, Paris, 15-20 Juillet 2002), Institute of Physics. Conference Series Number 173, Bristol and Philadelphia. Institute of Physics Publishing. pp. 51-60 (2003)
Carbone A, Seeman NC. Coding and geometrical shapes in nanostructures: a fractal DNA-assembly. Natural Computing. 2, pp.133–151 (2003).
Carbone A, Gromov M. Functional labels and syntactic entropy on DNA strings and proteins. Theoretical computer science. 303, pp.35–51 (2003).
Cosentino Lagomarsino M, Dogterom M, Dijkstra M. Isotropic–nematic transition of long, thin, hard spherocylinders confined in a quasi-two-dimensional planar geometry. The Journal of chemical physics. 119, pp.3535–3540 (2003).
Merendino L, Falciatore A, Rochaix J-D. Expression and RNA binding properties of the chloroplast ribosomal protein S1 from Chlamydomonas reinhardtii. Plant Mol Biol. 53(3), pp.371-82 (2003).
Cosentino Lagomarsino M, Jona P, Bassetti B. Metachronal waves for deterministic switching two-state oscillators with hydrodynamic interaction. Phys Rev E Stat Nonlin Soft Matter Phys. 68(2 Pt 1), pp.021908 (2003).
Carbone A, Zinovyev A, Képès F. Codon adaptation index as a measure of dominating codon bias. Bioinformatics. 19(16), pp.2005-15 (2003).
Mishra B, Daruwala R-S, Zhou Y, Ugel N, Policriti A, Antoniotti M, Paxia S, Rejali M, Rudra A, Cherepinsky V, Silver N, Casey W, Piazza C, Simeoni M, Barbano P, Spivak M, Feng J, Gill O, Venkatesh M, Cheng F, Sun B, Ioniata I, Anantharaman T, E Hubbard JAlbert, Pnueli A, Harel D, Chandru V, Hariharan R, Wigler M, Park F, Lin S-C, Lazebnik Y, Winkler F, Cantor CR, Carbone A, Gromov M. A sense of life: computational and experimental investigations with models of biochemical and evolutionary processes. OMICS. 7(3), pp.253-68 (2003).
Richard H, Nuel G. SPA: Simple web tool to assess statistical significance of DNA patterns. Nucleic Acids Res. 31(13), pp.3679-81 (2003).

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