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Publications

Bernardes JS, Vaquero C, Carbone A.
Plasmobase: a comparative database of predicted domain architectures for Plasmodium genomes.
Malar J. 16(1), (2017).
Jaubert M, Bouly J-P, d'Alcalà MRibera, Falciatore A.
Light sensing and responses in marine microalgae.
Curr Opin Plant Biol. 37, pp.70-77 (2017).
Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, Wu T, Barry KW, Falciatore A, Ferrante MI, Fortunato AE, Glöckner G, Gruber A, Hipkin R, Janech MG, Kroth PG, Leese F, Lindquist EA, Lyon BR, Martin J, Mayer C, Parker M, Quesneville H, Raymond JA, Uhlig C, Valas RE, Valentin KU, Worden AZ, E Armbrust V, Clark MD, Bowler C, Green BR, Moulton V, van Oosterhout C, Grigoriev IV.
Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.
Nature. 541(7638), pp.536-540 (2017).
Laine E
Decrypting how protein move and change their shape.
in Proceeding of 16th International Symposium on Mathematical and Computational Biology. Edited by: Rubem P Mondaini (Federal University of Rio de Janeiro, Brazil). Nankai University, Tianjin, China, 30th Oct. – 5th Nov. 2016. Chern Institute of Mathematics. (2017)
Carbone A
Conservation, co-évolution et dynamique : de la séquence à la fonction.
in Colloque de Cerisy “Sciences de la vie, sciences de l’information”. Edited by: Maurel M-C., Pomerol J-C., Gaudin T., Lacroix D., ISTE Éditions Ltd (2017)
Gherardi M, Cosentino Lagomarsino M
Procedures for model-guided data analysis of chromosomal loci dynamics at short time scales.
in Methods in Molecular Biology. The Bacterial Nucleoid - Methods and Protocols . Edited by: Espeli, Olivier. Springer Publishing Company, Incorporated. (2017)
Dal Co A, Cosentino Lagomarsino M, Caselle M, Osella M.
Stochastic timing in gene expression for simple regulatory strategies.
Nucleic Acids Research. 45, pp.1069 (2017).
Dell’Aquila G, Ferrante M, Gherardi M, Cosentino Lagomarsino M, d’Alcala MRibera, Iudicone D, Amato A.
Nutrient consumption and chain tuning in diatoms exposed to storm-like turbulence.
Scientific Reports. (2017).
Osella M, Tans SJ, Cosentino Lagomarsino M.
Step by Step, Cell by Cell: Quantification of the Bacterial Cell Cycle.
Trends in MicrobiologyTrends in Microbiology. 25(4), pp.250 - 256 (2017).
Wlodarski M, Raciti B, Kotar J, Cosentino Lagomarsino M, Fraser GM, Cicuta P.
Both genome and cytosol dynamics change in E. coli challenged with sublethal rifampicin.
Physical Biology. 14, pp.015005 (2017).
Grilli J, Osella M, Kennard AS, Cosentino Lagomarsino M.
Relevant parameters in models of cell division control.
Phys. Rev. E. 95, pp.032411 (2017).
Uguzzoni G, Lovis SJohn, Oteri F, Schug A, Szurmant H, Weigt M.
Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis.
Proceedings of the National Academy of Sciences. 114, pp.E2662-E2671 (2017).
Amato A, Dell'Aquila G, Musacchia F, Annunziata R, Ugarte A, Maillet N, Carbone A, Riberà d'Alcalà M, Sanges R, Iudicone D, Ferrante MI.
Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions.
Scientific Reports. 7(1), (2017).
Oteri F, Nadalin F, Champeimont R, Carbone A.
BIS2Analyzer: a server for coevolution analysis of conserved protein families.
Nucleic Acids Research. (2017).
Yue J-X, Li J, Aigrain L, Hallin J, Persson K, Oliver K, Bergstrom A, Coupland P, Warringer J, Cosentino Lagomarsino M, Fischer G, Durbin R, Liti G.
Contrasting evolutionary genome dynamics between domesticated and wild yeasts.
Nat Genet. 49(6), pp.913-924 (2017).

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