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Publications

Wlodarski M, Raciti B, Kotar J, Cosentino Lagomarsino M, Fraser GM, Cicuta P.
Both genome and cytosol dynamics change in E. coli challenged with sublethal rifampicin.
Physical Biology. 14, pp.015005 (2017).
Grilli J, Osella M, Kennard AS, Cosentino Lagomarsino M.
Relevant parameters in models of cell division control.
Phys. Rev. E. 95, pp.032411 (2017).
Osella M, Tans SJ, Cosentino Lagomarsino M.
Step by Step, Cell by Cell: Quantification of the Bacterial Cell Cycle.
Trends in MicrobiologyTrends in Microbiology. 25(4), pp.250 - 256 (2017).
Uguzzoni G, Lovis SJohn, Oteri F, Schug A, Szurmant H, Weigt M.
Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis.
Proceedings of the National Academy of Sciences. 114, pp.E2662-E2671 (2017).
Amato A, Dell'Aquila G, Musacchia F, Annunziata R, Ugarte A, Maillet N, Carbone A, Riberà d'Alcalà M, Sanges R, Iudicone D, Ferrante MI.
Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions.
Scientific Reports. 7(1), (2017).
Oteri F, Nadalin F, Champeimont R, Carbone A.
BIS2Analyzer: a server for coevolution analysis of conserved protein families.
Nucleic Acids Research. (2017).
Yue J-X, Li J, Aigrain L, Hallin J, Persson K, Oliver K, Bergstrom A, Coupland P, Warringer J, Cosentino Lagomarsino M, Fischer G, Durbin R, Liti G.
Contrasting evolutionary genome dynamics between domesticated and wild yeasts.
Nat Genet. 49(6), pp.913-924 (2017).
Lepetit B, Gelin G, Lepetit M, Sturm S, Vugrinec S, Rogato A, Peter K, Falciatore A, Lavaud J.
The diatom Phaeodactylum tricornutum adjusts NPQ capacity in response to dynamic light via fine-tuned Lhcx and xanthophyll cycle pigment synthesis.
New Phytologist. 214(1), pp.1469-8137 (2017).
Laine E, Carbone A.
Protein social behaviour makes a stronger signal for partner identification than surface geometry.
Proteins. 85(1), pp.137-154 (2017).
Rast LI, IM Rouzine, Rozhnova G, Bishop L, Weinberger AD, Weinberger LS.
Conflicting Selection Pressures Will Constrain Viral Escape from Interfering Particles: Principles for Designing Resistance-Proof Antivirals.
PLoS Comput Biol. 12(5), pp.e1004799 (2016).
Xiao Y, IM Rouzine, Bianco S, Acevedo A, Goldstein EFaul, Farkov M, Brodsky L, Andino R.
RNA Recombination Enhances Adaptability and Is Required for Virus Spread and Virulence.
Cell Host Microbe. 19(4), pp.493-503 (2016).
Tian M, Ye-Lehmann S.
Allosteric regulation in NMDA receptors revealed by the genetically encoded photo-cross-linkers.
Scientific Reports. 6, pp.34751 (2016).
Chen Y, Ma J, Lu W, Tian M, Thauvin M, Yuan C, Volovitch M, Wang Q, Holst J, Liu M, Vriz S, Ye-Lehmann S, Wang L, Li D.
Heritable expansion of the genetic code in mouse and zebrafish.
Cell Res. (2016).
Chen Y, Lu W, Gao N, Long Y, Shao Y, Liu M, Chen H, Ye S, Ma X, Liu M, Li D.
Generation of obese rat model by transcription activator-like effector nucleases targeting the leptin receptor gene.
Sci China Life Sci. (2016).
Barrat-Charlaix P, Figliuzzi M, Weigt M.
Improving landscape inference by integrating heterogeneous data in the inverse Ising problem.
Sci. Rep. 6, 37812, (2016).

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