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Publications

Chen Y, Ma J, Lu W, Tian M, Thauvin M, Yuan C, Volovitch M, Wang Q, Holst J, Liu M, Vriz S, Ye-Lehmann S, Wang L, Li D.
Heritable expansion of the genetic code in mouse and zebrafish.
Cell Res. (2016).
Barrat-Charlaix P, Figliuzzi M, Weigt M.
Improving landscape inference by integrating heterogeneous data in the inverse Ising problem.
Sci. Rep. 6, 37812, (2016).
Coucke A, Uguzzoni G, Oteri F, Cocco S, Monasson R, Weigt M.
Direct coevolutionary couplings reflect biophysical residue interactions in proteins.
The Journal of Chemical Physics. 145, pp.174102-17 (2016).
Delaveau T, Davoine D, Jolly A, Vallot A, Rouviere JO, Gerber A, Brochet S, Plessis M, Roquigny R, Merhej J, Leger T, Garcia C, Lelandais G, Laine E, Palancade B, Devaux F, Garcia M.
Tma108, a putative M1 aminopeptidase, is a specific nascent chain-associated protein in Saccharomyces cerevisiae.
Nucleic Acids Res. 44(18), pp.8826-8841 (2016).
Ripoche H, Laine E, Ceres N, Carbone A.
JET2 Viewer: a database of predicted multiple, possibly overlapping, protein-protein interaction sites for PDB structures.
Nucleic Acids Research. (2016).
Hannezo E, Coucke A, Joanny J-F.
Interplay of migratory and division forces as a generic mechanism for stem cell patterns.
Phys. Rev. E. 93, pp.022405 (2016).
Gueudré T, Baldassi C, Zamparo M, Weigt M, Pagnani A.
Simultaneous identification of specifically interacting paralogs and inter-protein contacts by Direct-Coupling Analysis.
Proc. Natl. Acad. Sci. 113(43), pp.12186-12191 (2016).
Simonson T, Ye-Lehmann S, Palmai Z, Amara N, Wydau-Dematteis S, Bigan E, Druart K, Moch C, Plateau P.
Redesigning the stereospecificity of tyrosyl-tRNA synthetase.
Proteins. 84(2), pp.240-53 (2016).
MetaSUB International Consortium, Lafontaine I, Richard H.
The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report.
Microbiome. 4(1), pp.24 (2016).
Gherardi M, Amato A, Bouly J-P, Cheminant Navarro S, Ferrante MI, Riberà d'Alcalà M, Iudicone D, Falciatore A, Cosentino Lagomarsino M.
Regulation of chain length in two diatoms as a growth-fragmentation process.
Phys. Rev. E. 94, pp.022418 (2016).
Rotondo P, Molinari LGuido, Ratti P, Gherardi M.
Devil's Staircase Phase Diagram of the Fractional Quantum Hall Effect in the Thin-Torus Limit.
Phys Rev Lett. 116(25), pp.256803 (2016).
Javer A, Cosentino Lagomarsino M, Cicuta P.
Bacterial Chromosome Dynamics by Locus Tracking in Fluorescence Microscopy.
Methods Mol Biol. 1431, pp.161-73 (2016).
Feinauer C, Szurmant H, Weigt M, Pagnani A.
Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp Operon.
PLoS ONE. 11, pp.1-18 (2016).
Sigwalt A, Caradec C, Brion C, Hou J, de Montigny J, Jung P, Fischer G, Llorente B, Friedrich A, Schacherer J.
Dissection of quantitative traits by bulk segregant mapping in a protoploid yeast species.
FEMS Yeast Res. (2016).
Bernardes JS, Zaverucha G, Vaquero C, Carbone A.
Improvement in protein domain identification is reached by breaking consensus, with the agreement of many profiles and domain co-occurrence.
PLoS Computational Biology. 12(7), (2016).

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