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Publications

Váchová L, Devaux F, Kučerová H, Ricicová M, Jacq C, Palková Z.
Sok2p transcription factor is involved in adaptive program relevant for long term survival of Saccharomyces cerevisiae colonies.
J Biol Chem. 279(36), pp.37973-81 (2004).
Boyer J, Badis G, Fairhead C, Talla E, Hantraye F, Fabre E, Fischer G, Hennequin C, Koszul R, Lafontaine I, Ozier-Kalogeropoulos O, Ricchetti M, Richard G-F, Thierry A, Dujon B.
Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae.
Genome Biol. 5(9), pp.R72 (2004).
Koszul R, Caburet S, Dujon B, Fischer G.
Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments.
EMBO J. 23(1), pp.234-43 (2004).
Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P.
yMGV: a cross-species expression data mining tool.
Nucleic Acids Res. 32(Database issue), pp.D323-5 (2004).
Recchi C, Sclavi B, Rauzier J, Gicquel B, Reyrat J-M.
Mycobacterium tuberculosis Rv1395 is a class III transcriptional regulator of the AraC family involved in cytochrome P450 regulation.
J Biol Chem. 278(36), pp.33763-73 (2003).
IM Rouzine, F McKenzie E.
Link between immune response and parasite synchronization in malaria.
Proc Natl Acad Sci U S A. 100(6), pp.3473-8 (2003).
IM Rouzine, Wakeley J, Coffin JM.
The solitary wave of asexual evolution.
Proc Natl Acad Sci U S A. 100(2), pp.587-92 (2003).
Ye S, Strzalka J, Chen X, Moser CC, P. Dutton L, J. Blasie K.
Assembly of a Vectorially Oriented Four-Helix Bundle at the Air/Water Interface via Directed Electrostatic Interactions.
LangmuirLangmuir. 19(5), pp.1515 - 1521 (2003).
Bourgine P, Carbone A, Gromov M, Képès F (Eds.)
Macromolecular Interplay and Traffic on DNA.
ComPlexUs. Basel. S. Karger AG. (2003).
Bourgine P, Carbone A, Gromov M, Képès F (Eds.)
Macromolecular Networks, a collection of articles on the theme.
ComPlexUs. Kluwer. (2003).
Carbone A, Gromov M.
Functional labels and syntactic entropy on DNA strings and proteins.
Theoretical computer science. 303, pp.35–51 (2003).
Carbone A, Seeman NC.
Coding and geometrical shapes in nanostructures: a fractal DNA-assembly.
Natural Computing. 2, pp.133–151 (2003).
Cosentino Lagomarsino M, Dogterom M, Dijkstra M.
Isotropic–nematic transition of long, thin, hard spherocylinders confined in a quasi-two-dimensional planar geometry.
The Journal of chemical physics. 119, pp.3535–3540 (2003).
Carbone A
Cooperativity and symmetry at biological scales.
in GROUP-24: Physical and Mathematical Aspects of Symmetries (Proceedings of the 24th International Colloquium on Group Theoretical Methods in Physics, Paris, 15-20 Juillet 2002), Institute of Physics. Conference Series Number 173, Bristol and Philadelphia. Institute of Physics Publishing. pp. 51-60 (2003)
Richard H, Nuel G.
SPA: Simple web tool to assess statistical significance of DNA patterns.
Nucleic Acids Res. 31(13), pp.3679-81 (2003).

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