What does protein diversity look like?
D.J. Zea, H. Richard*, and E. Laine* (2022) Bioinformatics.
Which versions of my favourite protein are conserved in evolution?
D.J. Zea, S. Laskina, A. Baudin, H. Richard*, and E. Laine* (2021) Genome Research.
PhyloSofS
Where does this proteoform originate from?
A. Ait-Hamlat, D.J. Zea, A. Labeeuw, L. Polit, H. Richard*, and E. Laine* (2021) J. Mol. Biol.
HOPMA
More freedom to the proteins!
E. Laine* and S. Grudinin* (2021) J. Phys. Chem. B
How does my favourite protein move?
S. Grudinin+, E. Laine+, and A. Hoffmann (2020) Biophys. J. A. Hoffmann and S. Grudinin (2017) J. Chem. Th. Comput.
Is this mutation deleterious?
E. Laine*, Y. Karami and A. Carbone*. (2019) Mol. Biol. Evol.
JET2DNA
Where are the DNA-binding sites on that protein?
E. Laine*, Y. Karami and A. Carbone*. (2019) PLoS Comput. Biol.
dynJET2
Through which sites does my favourite protein bind to its partners?
C. Dequeker, E. Laine* and A. Carbone* (2019) Proteins.
COMMA2
What are the sensitive residues in my favourite protein and what structural roles do they play?
Y. Karami, T. Bitard-Feildel, E. Laine* and A. Carbone* (2018) Scientific Reports. Y. Karami, E. Laine* and A. Carbone* (2015) BMC Bioinformatics.
INTBuilder
What residues are at the interface of that complex?
C. Dequeker, E. Laine* and A. Carbone* (2017) J. Chem. Inf. Model.
JET2Viewer
Which interfaces with which properties?
H.Ripoche+, E. Laine+, N. Ceres and A. Carbone (2017) Nucl. Acids Res. E. Laine* and A. Carbone* (2015) PLoS Comput. Biol. S. Engelen, L.A. Trojan, S. Sacquin-Mora, R. Lavery, and A. Carbone (2009) PLoS Comput. Biol.
MONETA
How does information propagate through this protein structure?
A. Allain, I. C. de Beauchêne, F. Langenfeld, Y. Guarracino, E. Laine and L. Tchertanov (2014) Faraday discussions. E. Laine, C. Auclair and L. Tchertanov. (2012) PLoS Comput. Biol.