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Gilles Fischer
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Found 48 results
Filters: Keyword is Genomic Instability and Author is Emmanuelle Issakidis-Bourguet [Clear All Filters]
The budding yeast life cycle: More complex than anticipated?. Yeast. 38(1), pp.5-11 (2021).
. An evolutionary model identifies the main evolutionary biases for the evolution of genome-replication profiles. (Eds.). eLife. 10, pp.e63542 (2021).
. A Versatile Protocol to Generate Translocations in Yeast Genomes Using CRISPR/Cas9. in Yeast Protocols. New York, NY. Springer US. pp. 181–198 (2021)
Highly contiguous nanopore genome assembly of Chlamydomonas reinhardtii CC-1690. Microbiol Resour Announc. (2020).
. Molecular profiling of beer wort fermentation diversity across natural Saccharomyces eubayanus isolates. Microbial Biotechnology. 13, pp.1012-1025 (2020).
. MUM&Co: Accurate detection of all SV types through whole genome alignment. Bioinformatics (Oxford, England). 36(10), pp.3242-3243 (2020).
. Phylogenetic reconstruction based on synteny block and gene adjacencies. Molecular Biology and Evolution. 37(9), pp.2747–2762 (2020).
. André Goffeau's imprinting on second generation yeast “genomologists”. Yeast. 36(4), pp.167 - 175 (2019).
. Reshuffling yeast chromosomes with CRISPR/Cas9. PLOS Genetics. 15, pp.1-26 (2019).
. Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi-C. Mol Syst Biol. 14(7), pp.e8293 (2018).
. The evolution of the temporal program of genome replication. Nat Commun. 9(1), pp.2199 (2018).
. A molecular portrait of de novo genes in yeasts. Mol Biol Evol. 35(3), pp.631-645 (2018).
. Contrasting evolutionary genome dynamics between domesticated and wild yeasts. Nat Genet. 49(6), pp.913-924 (2017).
. Dissection of quantitative traits by bulk segregant mapping in a protoploid yeast species. FEMS Yeast Res. (2016).
. Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genus. Genome Res. (2016).
. A Versatile Procedure to Generate Genome-Wide Spatiotemporal Program of Replication in Yeast Species. in Yeast Functional Genomics. 1361, Springer New York. pp. 247-264 (2016)
bz-rates: A Web Tool to Estimate Mutation Rates from Fluctuation Analysis. G3: Genes|Genomes|Genetics. (2015).
. Population genomics reveals chromosome-scale heterogeneous evolution in a protoploid yeast. Molecular Biology and Evolution. 32(1), (2015).
. Ulysses: accurate detection of low-frequency structural variations in large insert-size sequencing libraries. Bioinformatics. 31(6), pp.801-8 (2015).
. Filling annotation gaps in yeast genomes using genome-wide contact maps. Bioinformatics. 30(15), pp.2105-13 (2014).
. A set of genetically diverged Saccharomyces cerevisiae strains with markerless deletions of multiple auxotrophic genes. Yeast. 31(3), pp.91-101 (2014).
. SynChro: a fast and easy tool to reconstruct and visualize synteny blocks along eukaryotic chromosomes. PLoS One. 9(3), pp.e92621 (2014).
. Total synthesis of a functional designer eukaryotic chromosome. Science. 344(6179), pp.55-8 (2014).
. Combinatorics of chromosomal rearrangements based on synteny blocks and synteny packs. Journal of Logic and Computation. 23, pp.815–838 (2013).
. The spatiotemporal program of replication in the genome of Lachancea kluyveri. Genome Biol Evol. 5(2), pp.370-88 (2013).
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