You are here
Juliana Silva Bernardes
Primary tabs
Found 17 results
Filters: Keyword is Oligonucleotide Array Sequence Analysis and Author is Werner, Michel [Clear All Filters]
A comparative pan-genomic analysis of 53 C. pseudotuberculosis strains based on functional domains. Journal of Biomolecular Structure and Dynamics. pp.1-13 (2020).
. Structure-specific DNA recombination sites: Design, validation, and machine learning–based refinement. Science Advances. 6, (2020).
. Homology Inference Based on a Reconciliation Approach for the Comparative Genomics of Protozoa. Evolutionary Bioinformatics. 14, pp.1176934318785138 (2018).
. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. PLoS One. (2018).
. Meet-U: Educating through research immersion. PLOS Computational Biology. 14, pp.1-10 (2018).
. . Plasmobase: a comparative database of predicted domain architectures for Plasmodium genomes. Malar J. 16(1), (2017).
. Diatom Phytochromes Reveal the Existence of Far-Red-Light-Based Sensing in the Ocean. The Plant Cell. 28(3), pp.616 - 628 (2016).
. Improvement in protein domain identification is reached by breaking consensus, with the agreement of many profiles and domain co-occurrence. PLoS Computational Biology. 12(7), (2016).
. Evaluation and improvements of clustering algorithms for detecting remote homologous protein families. BMC Bioinformatics. 16(1), pp.34 (2015).
. A multi-objective optimization approach accurately resolves protein domain architectures. Bioinformatics. (2015).
. A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models. BMC Bioinformatics. 12, pp.83 (2011).
. Remote Homology Detection Through Discriminative Statistical Relational Learning. in The European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases. (2008)
Structural descriptor database: a new tool for sequence-based functional site prediction. BMC Bioinformatics. 9, pp.492 (2008).
. Improving model construction of profile HMMs for remote homology detection through structural alignment. BMC Bioinformatics. 8, pp.435 (2007).
.