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Publications

Karami Y, Saighi P, Vanderhaegen R, Gerlier D, Longhi S, Laine E, Carbone A*. Predicting substitutions to modulate disorder and stability in coiled-coils. BMC Bioinformatics. 21(573 ), (2020).
Le Moigne T, Crozet P, Lemaire SD, Henri J. High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from -An Enzyme Involved in the Photosynthetic Calvin-Benson Cycle. Int J Mol Sci. 21(20), (2020).
Rouzine IM. An evolutionary model of progression to AIDS. Microorganisms 2020. 8(11), (2020).
Kim J, Perthame B, Salort D. Fast Voltage Dynamics of Voltage–Conductance Models for Neural Networks. (2020).
Martins L, Knuesting J, Bariat L, Dard A, Freibert SA, Marchand CH, Young D, Dung NHo Thuy, Voth W, Debures A, Saez-Vasquez J, Lemaire SD, Lill R, Messens J, Scheibe R, Reichheld J-P, Riondet C. Redox Modification of the Iron-Sulfur Glutaredoxin GRXS17 Activates Holdase Activity and Protects Plants from Heat Stress. Plant Physiology. 184, pp.676–692 (2020).
Dezaire A, Marchand CH, Vallet M, Ferrand N, Chaouch S, Mouray E, Larsen AK, Sabbah M, Lemaire SD, Prado S, Escargueil AE. Secondary Metabolites from the Culture of the Marine-derived Fungus PC 362H and Evaluation of the Anticancer Activity of Its Metabolite Hyalodendrin. Mar Drugs. 18(4), (2020).
Nivina A, Grieb MSvea, Loot C, Bikard D, Cury J, Shehata L, Bernardes JS, Mazel D. Structure-specific DNA recombination sites: Design, validation, and machine learning–based refinement. Science Advances. 6, (2020).
Bernardes JS, Eberle RJ, Vieira FRJ, Coronado MA. A comparative pan-genomic analysis of 53 C. pseudotuberculosis strains based on functional domains. Journal of Biomolecular Structure and Dynamics. pp.1-13 (2020).
Mardones W, Villarroel CA, Krogerus K, Tapia SM, Urbina K, Oporto CI, O'Donnell S, Minebois R, Nespolo R, Fischer G, Querol A, Gibson B, Cubillos FA. Molecular profiling of beer wort fermentation diversity across natural Saccharomyces eubayanus isolates. Microbial Biotechnology. 13, pp.1012-1025 (2020).
Cristofalo M, Marrano CA, Salerno D, Corti R, Cassina V, Sclavi B, Gherardi M, Mammola A, M. Lagomarsino C, Mantegazza F. Cooperative effects on the compaction of DNA fragments by the nucleoid protein H-NS and the crowding agent PEG probed by Magnetic Tweezers. Biochimica et Biophysica Acta (BBA) - General Subjects. 1864(12), pp.129725 (2020).
O'Donnell S, Chaux F, Fischer G. Highly contiguous nanopore genome assembly of Chlamydomonas reinhardtii CC-1690. Microbiol Resour Announc. (2020).
Si Y, Grazon C, Clavier G, Rieger J, Tian Y, Audibert J-F, Sclavi B, Méallet-Renault R. Fluorescent copolymers for bacterial bioimaging and viability detection. ACS SensorsACS Sensors. (2020).
Crozat E, Tardin C, Salhi M, Rousseau P, Lablaine A, Bertoni T, Holcman D, Sclavi B, Cicuta P, Cornet F. Post-replicative pairing of sister ter regions in Escherichia coli involves multiple activities of MatP. Nature Commun. 11(1), pp.3796 (2020).
Gandarilla-Pérez CA, Mergny P, Weigt M, Bitbol A-F. Statistical physics of interacting proteins: Impact of dataset size and quality assessed in synthetic sequences. Phys. Rev. E. 101, pp.032413 (2020).
Muscat M, Croce G, Sarti E, Weigt M. FilterDCA: interpretable supervised contact prediction using inter-domain coevolution. PLOS Computational Biology. 16, (2020).

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