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Publications

Douam F, Fusil F, Enguehard M, Dib L, Nadalin F, Schwaller L, Hrebikova G, Mancip J, Mailly L, Montserret R, Ding Q, Maisse C, Carlot E, Xu K, Verhoeyen E, Baumert T, Ploss A, Carbone A, Cosset FL, Lavillette D.
A protein coevolution method designed for conserved sequences uncovers critical features of the original HCV fusion mechanism and provides molecular basis for the design of effective antiviral strategies.
PLoS Pathogens. (In Press).
Shrestha AMS, Asai K, Frith M, Richard H.
A new framework for the identification of Genomic Structural Variant using Joint Alignment of Reads.
Nucleic Acids Research. (In Press).
Krakau S, Richard H, Marsico A.
PureCLIP: Capturing Target-Specific protein-RNA Interaction Footprints from Single-Nucleotide CLIP-Seq Data.
Genome Biology. (In Press).
Villanova V, Fortunato AE, Singh D, Dal Bo D, Conte M, Obata T, Jouhet J, Fernie AR, Marechal E, Falciatore A, Pagliardini J, Le Monnier J, Poolman M, G C, Petroutsos D, Finazzi G.
Investigating mixotrophic metabolism in the model diatom Phaeodactylum tricornutum.
Phil. Trans. R. Soc. B. (In Press).
Matuszyńska A, Moejes F, Adhikari K, Bassi R, Cariti F, Cogne G, Dikaios I, Falciatore A, Finazzi G, Flori S, Goldschmidt-Clermont M, Magni S, Maguire J, Le Monnier A, Mueller K, Poolman M, Singh D, Spelberg S, Stella GR, Succurro A, Taddei L, Urbain B, Villanova V, Zabke C, Ebenhöh O.
A systems-wide understanding of the photosynthetic acclimation in algae and higher plants - retrospection and perspectives.
J Exp Bot. (In Press).
Tian M, Ye-Lehmann S
Engineering light sensitive NMDARs.
in Methods in Molecular Biology. Edited by: Szepetowski P. and Burnashev N. John Wiley & Sons, Inc. (In Press)
Tian M, Wang Q, Ye-Lehmann S
Elucidating GPCR structural function relationship through genetic code expansion.
in Topics in Medicinal Chemistry. Edited by: Granier S. and Lebon G. Springer. (In Press)
Figliuzzi M, Barrat-Charlaix P, Weigt M.
How Pairwise Coevolutionary Models Capture the Collective Residue Variability in Proteins?.
Molecular Biology and Evolution. pp.msy007 (2018).
Barrat-Charlaix P, Weigt M.
De la variabilité des séquences à la prédiction structurale et fonctionnelle : modélisation de familles de protéines homologues.
Biologie Aujourd’hui. 211(3), pp.239-244 (2017).
Moejes FWanjiku, Matuszynska A, Adhikari K, Bassi R, Cariti F, Cogne G, Dikaios I, Falciatore A, Finazzi G, Flori S, Goldschmidt-Clermont M, Magni S, Maguire J, Le Monnier A, Müller K, Poolman M, Singh D, Spelberg S, Stella GRocco, Succurro A, Taddei L, Urbain B, Villanova V, Zabke C, Ebenhöh O.
A systems-wide understanding of photosynthetic acclimation in algae and higher plants.
J Exp Bot. 68(11), pp.2667-2681 (2017).
Kirkham AR, Richthammer P, Schmidt K, Wustmann M, Maeda Y, Hedrich R, Brunner E, Tanaka T, van Pée K-H, Falciatore A, Mock T.
A role for the cell-wall protein silacidin in cell size of the diatom Thalassiosira pseudonana.
ISME J. 11(11), pp.2452-2464 (2017).
Villanova V, Fortunato AEmidio, Singh D, Dal Bo D, Conte M, Obata T, Jouhet J, Fernie AR, Marechal E, Falciatore A, Pagliardini J, Le Monnier A, Poolman M, Curien G, Petroutsos D, Finazzi G.
Investigating mixotrophic metabolism in the model diatom Phaeodactylum tricornutum.
Philos Trans R Soc Lond B Biol Sci. 372(1728), (2017).
Vakirlis NN, Hebert AS, Opulente DA, Achaz G, Hittinger CTodd, Fischer G, Coon JJ, Lafontaine I.
A molecular portrait of de novo genes in yeasts.
Mol Biol Evol. (2017).
Cocco S, Feinauer C, Figliuzzi M, Monasson R, Weigt M.
Inverse Statistical Physics of Protein Sequences: A Key Issues Review.
Rep. Prog. Phys. (2017).
Szurmant H, Weigt M.
Inter-residue, inter-protein and inter-family coevolution: bridging the scales.
Curr Opin Struct Biol. 50, pp.26-32 (2017).

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