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Publications

Montsant A, Allen AE, Coesel S, De Martino A, Falciatore A, Mangogna M, Siaut M, Heijde M, Jabbari K, Maheswari U, Rayko E, Vardi A, Apt KE, Berges JA, Chiovitti A, Davis AK, Thamatrakoln K, Hadi MZ, Lane TW, J. Lippmeier C, Martinez D, Parker MS, Pazour GJ, Saito MA, Rokhsar DS, E. Armbrust V, Bowler C. Identification and comparative genomic analysis of signaling and regulatory components in the diatom Thalassiosira pseudonana. Journal of Phycology. 43, pp.585–604 (2007).
Breton J, Bart-Delabesse E, Biligui S, Carbone A*, Seiller X, Okome-Nkoumou M, Nzamba C, Kombila M, Accoceberry I, Thellier M. New Highly Divergent rRNA Sequence among Biodiverse Genotypes of Enterocytozoon bieneusi Strains Isolated from Humans in Gabon and Cameroon. Journal of Clinical Microbiology. 45, pp.2580-2589 (2007).
Bassetti F, Cosentino Lagomarsino M, Mandrà S. Exchangeable random networks. Internet Mathematics. 4, pp.357–400 (2007).
Lacoste D, Cosentino Lagomarsino M, Joanny JF. Fluctuations of a driven membrane in an electrolyte. EPL (Europhysics Letters). 77, pp.18006 (2007).
Carbone A* Adaptation studied with the self-consistent codon index: genomic spaces, metabolic network comparison, minimal gene sets and viral classification. in Proceedings of the Evry Spring School on Modelling Complex Biological Systems in the Context of Genomics. Genopole, Evry. EDP Sciences. (2007)
Baussand J, Deremble C, Carbone A*. Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins. Proteins. 67(3), pp.695-708 (2007).
Garcia M, Darzacq X, Delaveau T, Jourdren L, Singer RH, Jacq C. Mitochondria-associated yeast mRNAs and the biogenesis of molecular complexes. Mol Biol Cell. 18(2), pp.362-8 (2007).
Bassetti F, Cosentino Lagomarsino M, Bassetti B, Jona P. Random networks tossing biased coins. Phys Rev E Stat Nonlin Soft Matter Phys. 75(5 Pt 2), pp.056109 (2007).
Garcia M, Darzacq X, Devaux F, Singer RH, Jacq C. Yeast mitochondrial transcriptomics. Methods Mol Biol. 372, pp.505-28 (2007).
Cosentino Lagomarsino M, Tanase C, Vos JW, Emons AMie C, Mulder BM, Dogterom M. Microtubule organization in three-dimensional confined geometries: evaluating the role of elasticity through a combined in vitro and modeling approach. Biophys J. 92(3), pp.1046-57 (2007).
Fardeau V, Lelandais G, Oldfield A, Salin H, Lemoine S, Garcia M, Tanty V, Le Crom S, Jacq C, Devaux F. The central role of PDR1 in the foundation of yeast drug resistance. J Biol Chem. 282(7), pp.5063-74 (2007).
Fusco D, Bassetti B, Jona P, Cosentino Lagomarsino M. DIA-MCIS: an importance sampling network randomizer for network motif discovery and other topological observables in transcription networks. Bioinformatics. 23(24), pp.3388-90 (2007).
Cosentino Lagomarsino M, Jona P, Bassetti B, Isambert H. Hierarchy and feedback in the evolution of the Escherichia coli transcription network. Proc Natl Acad Sci U S A. 104(13), pp.5516-20 (2007).
Siaut M, Heijde M, Mangogna M, Montsant A, Coesel S, Allen A, Manfredonia A, Falciatore A, Bowler C. Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum. Gene. 406(1-2), pp.23-35 (2007).
Leone M, Weigt M. Clustering by soft-constraint affinity propagation: applications to gene-expression data. Bioinformatics. 23(20), pp.2708-15 (2007).

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