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Publications

Perthame B, Salort D. On a voltage-conductance kinetic system for integrate and fire neural networks. ArXiv e-prints. (2013).
Jezequel N, Cosentino Lagomarsino M, Heslot F, Thomen P. Long-Term Diversity and Genome Adaptation of Acinetobacter baylyi in a Minimal-Medium Chemostat. Genome Biology and Evolution. 5, pp.87-97 (2013).
Szurmant H, Weigt M Genetic covariance. in Brenner's Encyclopedia of Genetics, 2nd edition. (2013)
Drillon G, Carbone A*, Fischer G. Combinatorics of chromosomal rearrangements based on synteny blocks and synteny packs. Journal of Logic and Computation. 23, pp.815–838 (2013).
Cocco S, Monasson R, Weigt M Inference of Hopfield-Potts patterns from covariation in protein families: calculation and statistical error bars. in Journal of Physics: Conference Series. 473, IOP Publishing. p. 012010 (2013)
Laine E, Carbone A* Identification of Protein Interaction Partners from Shape Complementarity Molecular Cross-Docking. in IEEE International Conference on Image Analysis and Processing (ICIAP) 2013 Workshops, LNCS 8158. Springer. pp. 318–325 (2013)
Mirauta B, Nicolas P, Richard H Pardiff: Inference of Differential Expression at Base-Pair Level from RNA-Seq Experiments. in IEEE International Conference on Image Analysis and Processing (ICIAP) 2013 Workshops, LNCS 8158. Springer. pp. 418–427 (2013)
Mathelier A, Carbone A*. Large scale chromosomal mapping of human microRNA structural clusters. Nucleic Acids Res. 41(8), pp.4392-408 (2013).
Javer A, Long Z, Nugent E, Grisi M, Siriwatwetchakul K, Dorfman KD, Cicuta P, Cosentino Lagomarsino M. Short-time movement of E. coli chromosomal loci depends on coordinate and subcellular localization. Nat Commun. 4, pp.3003 (2013).
Molinelli EJ, Korkut A, Wang W, Miller ML, Gauthier NP, Jing X, Kaushik P, He Q, Mills G, Solit DB, Pratilas CA, Weigt M, Braunstein A, Pagnani A, Zecchina R, Sander C. Perturbation biology: inferring signaling networks in cellular systems. PLoS Comput Biol. 9(12), pp.e1003290 (2013).
Agier N, Romano OMaria, Touzain F, Cosentino Lagomarsino M, Fischer G. The spatiotemporal program of replication in the genome of Lachancea kluyveri. Genome Biol Evol. 5(2), pp.370-88 (2013).
Long Z, Nugent E, Javer A, Cicuta P, Sclavi B, Cosentino Lagomarsino M, Dorfman KD. Microfluidic chemostat for measuring single cell dynamics in bacteria. Lab Chip. 13(5), pp.947-54 (2013).
Hanein S, Garcia M, Fares-Taie L, Serre V, De Keyzer Y, Delaveau T, Perrault I, Delphin N, Gerber S, Schmitt A, Masse J-M, Munnich A, Kaplan J, Devaux F, Rozet J-M. TMEM126A is a mitochondrial located mRNA (MLR) protein of the mitochondrial inner membrane. Biochim Biophys Acta. 1830(6), pp.3719-33 (2013).
Lopes A, Sacquin-Mora S, Dimitrova V, Laine E, Ponty Y, Carbone A*. Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information. PLoS Comput Biol. 9(12), pp.e1003369 (2013).
Mouaikel J, Causse SZ, Rougemaille M, Daubenton-Carafa Y, Blugeon C, Lemoine S, Devaux F, Darzacq X, Libri D. High-frequency promoter firing links THO complex function to heavy chromatin formation. Cell Rep. 5(4), pp.1082-94 (2013).

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